Consolidate "Jiang" citations

This commit is contained in:
Axel Kohlmeyer
2021-12-06 14:07:36 -05:00
parent b0305a09e9
commit 274ffe1f48
3 changed files with 8 additions and 13 deletions

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@ -491,11 +491,6 @@ NPT ensemble using Nose-Hoover thermostat:
**(Schroeder)** Schroeder and Steinhauser, J Chem Phys, 133,
154511 (2010).
.. _Jiang2:
**(Jiang)** Jiang, Hardy, Phillips, MacKerell, Schulten, and Roux,
J Phys Chem Lett, 2, 87-92 (2011).
.. _Thole2:
**(Thole)** Chem Phys, 59, 341 (1981).

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@ -40,7 +40,7 @@ Example input scripts available: examples/PACKAGES/drude
Description
"""""""""""
Apply two Langevin thermostats as described in :ref:`(Jiang) <Jiang1>` for
Apply two Langevin thermostats as described in :ref:`(Jiang1) <Jiang1>` for
thermalizing the reduced degrees of freedom of Drude oscillators.
This link describes how to use the :doc:`thermalized Drude oscillator model <Howto_drude>` in LAMMPS and polarizable models in LAMMPS
are discussed on the :doc:`Howto polarizable <Howto_polarizable>` doc
@ -300,5 +300,5 @@ The option defaults are zero = no.
.. _Jiang1:
**(Jiang)** Jiang, Hardy, Phillips, MacKerell, Schulten, and Roux, J
**(Jiang1)** Jiang, Hardy, Phillips, MacKerell, Schulten, and Roux, J
Phys Chem Lett, 2, 87-92 (2011).

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@ -78,7 +78,7 @@ The exclusion of unnecessary angles is achieved here by the cut-off function (`f
which induces only minimum modifications for LAMMPS.
Validation, benchmark tests, and applications of the *sw/mod* style
can be found in :ref:`(Jiang_1) <Jiang1>` and :ref:`(Jiang_2) <Jiang2>`.
can be found in :ref:`(Jiang2) <Jiang2>` and :ref:`(Jiang3) <Jiang3>`.
The *sw/mod* style computes the energy E of a system of atoms, whose potential
function is mostly the same as the Stillinger-Weber potential. The only modification
@ -285,10 +285,10 @@ style are `\delta_1 = 0.25` and `\delta_2 = 0.35`.
**(Stillinger)** Stillinger and Weber, Phys Rev B, 31, 5262 (1985).
.. _Jiang1:
**(Jiang_1)** J.-W. Jiang, Nanotechnology 26, 315706 (2015).
.. _Jiang2:
**(Jiang_2)** J.-W. Jiang, Acta Mech. Solida. Sin 32, 17 (2019).
**(Jiang2)** J.-W. Jiang, Nanotechnology 26, 315706 (2015).
.. _Jiang3:
**(Jiang3)** J.-W. Jiang, Acta Mech. Solida. Sin 32, 17 (2019).