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integrate into manual and add cross-references for CHARMM styles

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This commit is contained in:
Axel Kohlmeyer
2024-01-05 18:17:36 -05:00
parent aa5a4f5f64
commit 404b579396
3 changed files with 12 additions and 3 deletions
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4
doc/src/angle_charmm.rst
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@ -70,7 +70,9 @@ for more info.
Related commands Related commands
"""""""""""""""" """"""""""""""""
:doc:`angle_coeff <angle_coeff>` :doc:`angle_coeff <angle_coeff>`, :doc:`pair_style lj/charmm variants <pair_charmm>`,
:doc:`dihedral_style charmm <dihedral_charmm>`,
:doc:`dihedral_style charmmfsw <dihedral_charmm>`, :doc:`fix cmap <fix_cmap>`
Default Default
""""""" """""""

4
doc/src/dihedral_charmm.rst
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@ -147,7 +147,9 @@ for more info.
Related commands Related commands
"""""""""""""""" """"""""""""""""
:doc:`dihedral_coeff <dihedral_coeff>` :doc:`dihedral_coeff <dihedral_coeff>`,
:doc:`pair_style lj/charmm variants <pair_charmm>`,
:doc:`angle_style charmm <angle_charmm>`, :doc:`fix cmap <fix_cmap>`
Default Default
""""""" """""""

7
doc/src/pair_charmm.rst
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@ -16,6 +16,7 @@
.. index:: pair_style lj/charmm/coul/msm/omp .. index:: pair_style lj/charmm/coul/msm/omp
.. index:: pair_style lj/charmmfsw/coul/charmmfsh .. index:: pair_style lj/charmmfsw/coul/charmmfsh
.. index:: pair_style lj/charmmfsw/coul/long .. index:: pair_style lj/charmmfsw/coul/long
.. index:: pair_style lj/charmmfsw/coul/long/kk
pair_style lj/charmm/coul/charmm command pair_style lj/charmm/coul/charmm command
======================================== ========================================
@ -43,6 +44,8 @@ pair_style lj/charmmfsw/coul/charmmfsh command
pair_style lj/charmmfsw/coul/long command pair_style lj/charmmfsw/coul/long command
========================================= =========================================
Accelerator Variants: *lj/charmmfsw/coul/long/kk*
Syntax Syntax
"""""" """"""
@ -281,7 +284,9 @@ page for more info.
Related commands Related commands
"""""""""""""""" """"""""""""""""
:doc:`pair_coeff <pair_coeff>` :doc:`pair_coeff <pair_coeff>`, :doc:`angle_style charmm <angle_charmm>`,
:doc:`dihedral_style charmm <dihedral_charmm>`,
:doc:`dihedral_style charmmfsw <dihedral_charmm>`, :doc:`fix cmap <fix_cmap>`
Default Default
""""""" """""""