consistently use Kokkos:: namespace prefix when calling deep_copy()

src/KOKKOS/fix_acks2_reaxff_kokkos.cpp

@@ -1238,7 +1238,7 @@ int FixACKS2ReaxFFKokkos<DeviceType>::bicgstab_solve()
   rnorm = sqrt(norm_sqr);
 
   if (bnorm == 0.0 ) bnorm = 1.0;
-  deep_copy(d_r_hat,d_r);
+  Kokkos::deep_copy(d_r_hat,d_r);
   omega = 1.0;
   rho = 1.0;
 

src/KOKKOS/fix_neigh_history_kokkos.cpp

@@ -97,12 +97,12 @@ void FixNeighHistoryKokkos<DeviceType>::pre_exchange()
     Kokkos::parallel_for(nlocal_neigh,zero);
 
     h_resize() = 0;
-    deep_copy(d_resize, h_resize);
+    Kokkos::deep_copy(d_resize, h_resize);
 
     FixNeighHistoryKokkosPreExchangeFunctor<DeviceType> f(this);
     Kokkos::parallel_for(nlocal_neigh,f);
 
-    deep_copy(h_resize, d_resize);
+    Kokkos::deep_copy(h_resize, d_resize);
     if (h_resize() > 0) {
       maxpartner += 8;
       memoryKK->grow_kokkos(k_partner,partner,atom->nmax,maxpartner,"neighbor_history:partner");

src/KOKKOS/fix_shardlow_kokkos.cpp

@@ -596,7 +596,7 @@ void FixShardlowKokkos<DeviceType>::initial_integrate(int /*vflag*/)
     for (int i = 0; i < maxWorkItemCt; ++i) {
       es_genNextParallelState(serial_rand_state, h_rand_state(i));
     }
-    deep_copy(d_rand_state,h_rand_state);
+    Kokkos::deep_copy(d_rand_state,h_rand_state);
 
     maxRNG = maxWorkItemCt;
   }
@@ -606,8 +606,8 @@ void FixShardlowKokkos<DeviceType>::initial_integrate(int /*vflag*/)
     for (int j = 0; j < 3; ++j)
       h_counters(i,j) = 0;
   for (int i = 0; i < 32; ++i) h_hist[i] = 0;
-  deep_copy(d_counters, h_counters);
-  deep_copy(d_hist, h_hist);
+  Kokkos::deep_copy(d_counters, h_counters);
+  Kokkos::deep_copy(d_hist, h_hist);
 #endif
 
   //theta_ij_inv = 1.0/k_pairDPD->temperature; // independent of i,j

src/KOKKOS/nbin_kokkos.cpp

@@ -91,7 +91,7 @@ void NBinKokkos<DeviceType>::bin_atoms()
 
   while (h_resize() > 0) {
     h_resize() = 0;
-    deep_copy(d_resize, h_resize);
+    Kokkos::deep_copy(d_resize, h_resize);
 
     MemsetZeroFunctor<DeviceType> f_zero;
     f_zero.ptr = (void*) k_bincount.view<DeviceType>().data();
@@ -107,7 +107,7 @@ void NBinKokkos<DeviceType>::bin_atoms()
 
     Kokkos::parallel_for(atom->nlocal+atom->nghost, f);
 
-    deep_copy(h_resize, d_resize);
+    Kokkos::deep_copy(h_resize, d_resize);
     if (h_resize()) {
 
       atoms_per_bin += 16;

src/KOKKOS/nbin_ssa_kokkos.cpp

@@ -82,12 +82,12 @@ void NBinSSAKokkos<DeviceType>::bin_atoms_setup(int /*nall*/)
   h_lbinxhi() = 0; // Safe to = mbinx - stencil->sx - 1
   h_lbinyhi() = 0; // Safe to = mbiny - stencil->sy - 1
   h_lbinzhi() = 0; // Safe to = mbinz - stencil->sz - 1
-  deep_copy(d_lbinxlo, h_lbinxlo);
-  deep_copy(d_lbinylo, h_lbinylo);
-  deep_copy(d_lbinzlo, h_lbinzlo);
-  deep_copy(d_lbinxhi, h_lbinxhi);
-  deep_copy(d_lbinyhi, h_lbinyhi);
-  deep_copy(d_lbinzhi, h_lbinzhi);
+  Kokkos::deep_copy(d_lbinxlo, h_lbinxlo);
+  Kokkos::deep_copy(d_lbinylo, h_lbinylo);
+  Kokkos::deep_copy(d_lbinzlo, h_lbinzlo);
+  Kokkos::deep_copy(d_lbinxhi, h_lbinxhi);
+  Kokkos::deep_copy(d_lbinyhi, h_lbinyhi);
+  Kokkos::deep_copy(d_lbinzhi, h_lbinzhi);
 }
 
 /* ----------------------------------------------------------------------
@@ -128,12 +128,12 @@ void NBinSSAKokkos<DeviceType>::bin_atoms()
     NPairSSAKokkosBinIDAtomsFunctor<DeviceType> f(*this);
     Kokkos::parallel_reduce(nlocal, f, atoms_per_bin);
   }
-  deep_copy(h_lbinxlo, d_lbinxlo);
-  deep_copy(h_lbinylo, d_lbinylo);
-  deep_copy(h_lbinzlo, d_lbinzlo);
-  deep_copy(h_lbinxhi, d_lbinxhi);
-  deep_copy(h_lbinyhi, d_lbinyhi);
-  deep_copy(h_lbinzhi, d_lbinzhi);
+  Kokkos::deep_copy(h_lbinxlo, d_lbinxlo);
+  Kokkos::deep_copy(h_lbinylo, d_lbinylo);
+  Kokkos::deep_copy(h_lbinzlo, d_lbinzlo);
+  Kokkos::deep_copy(h_lbinxhi, d_lbinxhi);
+  Kokkos::deep_copy(h_lbinyhi, d_lbinyhi);
+  Kokkos::deep_copy(h_lbinzhi, d_lbinzhi);
 
   // find each ghost's binID (AIR number)
   {

src/KOKKOS/npair_ssa_kokkos.cpp

@@ -490,10 +490,10 @@ fprintf(stdout, "tota%03d total %3d could use %6d inums, expected %6d inums. inu
       h_ssa_gitemLen(ssa_gphaseCt-1,h_ssa_gphaseLen(ssa_gphaseCt-1)-1) - data.neigh_list.inum;
     firstTry = false;
 
-    deep_copy(data.h_resize, data.resize);
+    Kokkos::deep_copy(data.h_resize, data.resize);
 
     if (data.h_resize()) {
-      deep_copy(data.h_new_maxneighs, data.new_maxneighs);
+      Kokkos::deep_copy(data.h_new_maxneighs, data.new_maxneighs);
       list->maxneighs = data.h_new_maxneighs() * 1.2;
       list->d_neighbors = typename ArrayTypes<DeviceType>::t_neighbors_2d("neighbors", list->d_neighbors.extent(0), list->maxneighs);
       data.neigh_list.d_neighbors = list->d_neighbors;