Set default trimflag to zero
This commit is contained in:
@ -40,6 +40,7 @@ PairOxdna2Coaxstk::PairOxdna2Coaxstk(LAMMPS *lmp) : Pair(lmp)
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{
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{
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single_enable = 0;
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single_enable = 0;
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writedata = 1;
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writedata = 1;
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trim_flag = 0;
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}
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}
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/* ---------------------------------------------------------------------- */
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/* ---------------------------------------------------------------------- */
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@ -36,6 +36,7 @@ PairOxdna2Dh::PairOxdna2Dh(LAMMPS *lmp) : Pair(lmp)
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{
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{
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single_enable = 0;
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single_enable = 0;
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writedata = 1;
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writedata = 1;
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trim_flag = 0;
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}
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}
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/* ---------------------------------------------------------------------- */
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/* ---------------------------------------------------------------------- */
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@ -40,6 +40,7 @@ PairOxdnaCoaxstk::PairOxdnaCoaxstk(LAMMPS *lmp) : Pair(lmp)
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{
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{
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single_enable = 0;
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single_enable = 0;
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writedata = 1;
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writedata = 1;
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trim_flag = 0;
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}
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}
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/* ---------------------------------------------------------------------- */
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/* ---------------------------------------------------------------------- */
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@ -42,6 +42,7 @@ PairOxdnaExcv::PairOxdnaExcv(LAMMPS *lmp) : Pair(lmp)
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// set comm size needed by this Pair
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// set comm size needed by this Pair
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comm_forward = 9;
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comm_forward = 9;
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trim_flag = 0;
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}
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}
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/* ---------------------------------------------------------------------- */
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/* ---------------------------------------------------------------------- */
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@ -38,6 +38,7 @@ PairOxdnaHbond::PairOxdnaHbond(LAMMPS *lmp) : Pair(lmp)
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{
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{
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single_enable = 0;
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single_enable = 0;
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writedata = 1;
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writedata = 1;
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trim_flag = 0;
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// sequence-specific base-pairing strength
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// sequence-specific base-pairing strength
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// A:0 C:1 G:2 T:3, 5'- [i][j] -3'
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// A:0 C:1 G:2 T:3, 5'- [i][j] -3'
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@ -39,6 +39,7 @@ PairOxdnaStk::PairOxdnaStk(LAMMPS *lmp) : Pair(lmp)
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{
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{
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single_enable = 0;
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single_enable = 0;
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writedata = 1;
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writedata = 1;
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trim_flag = 0;
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// sequence-specific stacking strength
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// sequence-specific stacking strength
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// A:0 C:1 G:2 T:3, 3'- [i][j] -5'
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// A:0 C:1 G:2 T:3, 3'- [i][j] -5'
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@ -40,6 +40,7 @@ PairOxdnaXstk::PairOxdnaXstk(LAMMPS *lmp) : Pair(lmp)
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{
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{
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single_enable = 0;
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single_enable = 0;
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writedata = 1;
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writedata = 1;
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trim_flag = 0;
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}
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}
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/* ---------------------------------------------------------------------- */
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/* ---------------------------------------------------------------------- */
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@ -24,6 +24,7 @@ PairOxrna2Hbond::PairOxrna2Hbond(LAMMPS *lmp) : PairOxdnaHbond(lmp)
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{
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{
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single_enable = 0;
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single_enable = 0;
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writedata = 1;
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writedata = 1;
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trim_flag = 0;
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// sequence-specific base-pairing strength
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// sequence-specific base-pairing strength
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// A:0 C:1 G:2 U:3, 5'- [i][j] -3'
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// A:0 C:1 G:2 U:3, 5'- [i][j] -3'
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@ -41,6 +41,7 @@ PairOxrna2Stk::PairOxrna2Stk(LAMMPS *lmp) : Pair(lmp)
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{
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{
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single_enable = 0;
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single_enable = 0;
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writedata = 1;
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writedata = 1;
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trim_flag = 0;
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// sequence-specific stacking strength
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// sequence-specific stacking strength
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// A:0 C:1 G:2 U:3, 3'- [i][j] -5'
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// A:0 C:1 G:2 U:3, 3'- [i][j] -5'
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@ -40,6 +40,7 @@ PairOxrna2Xstk::PairOxrna2Xstk(LAMMPS *lmp) : Pair(lmp)
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{
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{
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single_enable = 0;
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single_enable = 0;
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writedata = 1;
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writedata = 1;
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trim_flag = 0;
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}
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}
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/* ---------------------------------------------------------------------- */
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/* ---------------------------------------------------------------------- */
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