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update broken URLs

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This commit is contained in:
Axel Kohlmeyer
2022-09-26 11:41:54 -04:00
parent 543e7b8b56
commit a4e92ed4a9
5 changed files with 23 additions and 30 deletions
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8
doc/src/compute_damage_atom.rst
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@ -32,12 +32,10 @@ The "damage" of a Peridynamics particles is based on the bond breakage
between the particle and its neighbors. If all the bonds are broken
the particle is considered to be fully damaged.
.. TODO the link below is broken
See the `PDLAMMPS user guide
<http://www.sandia.gov/~mlparks/papers/PDLAMMPS.pdf>`_ for a formal
definition of "damage" and more details about Peridynamics as it is
implemented in LAMMPS.
<https://download.lammps.org/pdfs/PDLAMMPS_user_guide.pdf>`_ for a
formal definition of "damage" and more details about Peridynamics as it
is implemented in LAMMPS.
This command can be used with all the Peridynamic pair styles.

12
doc/src/compute_dilatation_atom.rst
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@ -31,15 +31,13 @@ for an overview of LAMMPS commands for Peridynamics modeling.
For small deformation, dilatation of is the measure of the volumetric
strain.
.. TODO the link below is broken
The dilatation :math:`\theta` for each peridynamic particle :math:`i` is
calculated as a sum over its neighbors with unbroken bonds, where the
contribution of the :math:`ij` pair is a function of the change in bond length
(versus the initial length in the reference state), the volume
fraction of the particles and an influence function. See the
`PDLAMMPS user guide <http://www.sandia.gov/~mlparks/papers/PDLAMMPS.pdf>`_ for
a formal definition of dilatation.
contribution of the :math:`ij` pair is a function of the change in bond
length (versus the initial length in the reference state), the volume
fraction of the particles and an influence function. See the `PDLAMMPS
user guide <https://download.lammps.org/pdfs/PDLAMMPS_user_guide.pdf>`_
for a formal definition of dilatation.
This command can only be used with a subset of the Peridynamic
:doc:`pair styles <pair_peri>`: peri/lps, peri/ves and peri/eps.

4
doc/src/pair_cs.rst
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@ -114,7 +114,7 @@ Description
"""""""""""
These pair styles are designed to be used with the adiabatic
core/shell model of :ref:`(Mitchell and Fincham) <MitchellFincham2>`. See
core/shell model of :ref:`(Mitchell and Fincham) <MitchellFincham3>`. See
the :doc:`Howto coreshell <Howto_coreshell>` page for an overview of
the model as implemented in LAMMPS.
@ -196,7 +196,7 @@ none
----------
.. _MitchellFincham2:
.. _MitchellFincham3:
**(Mitchell and Fincham)** Mitchell, Fincham, J Phys Condensed Matter,
5, 1031-1038 (1993).

8
doc/src/pair_meam.rst
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@ -423,12 +423,8 @@ none
.. _Gullet:
**(Gullet)** Gullet, Wagner, Slepoy, SANDIA Report 2003-8782 (2003).
This report may be accessed on-line via `this link <sandreport_>`_.
.. TODO the following URL is not accessible
.. _sandreport: http://infoserve.sandia.gov/sand_doc/2003/038782.pdf
**(Gullet)** Gullet, Wagner, Slepoy, SANDIA Report 2003-8782 (2003). DOI:10.2172/918395
This report may be accessed on-line via `this link <https://download.lammps.org/pdfs/MEAM_report_2003.pdf>`_.
.. _Lee:

21
doc/src/pair_peri.rst
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@ -51,8 +51,9 @@ Description
"""""""""""
The peridynamic pair styles implement material models that can be used
at the mesoscopic and macroscopic scales. See `this document <PDF/PDLammps_overview.pdf>`_ for an overview of LAMMPS commands
for Peridynamics modeling.
at the mesoscopic and macroscopic scales. See `this document
<PDF/PDLammps_overview.pdf>`_ for an overview of LAMMPS commands for
Peridynamics modeling.
Style *peri/pmb* implements the Peridynamic bond-based prototype
microelastic brittle (PMB) model.
@ -66,14 +67,12 @@ peridynamic viscoelastic solid (VES) model.
Style *peri/eps* implements the Peridynamic state-based elastic-plastic
solid (EPS) model.
.. TODO the following URL is not valid
The canonical papers on Peridynamics are :ref:`(Silling 2000)
<Silling2000>` and :ref:`(Silling 2007) <Silling2007>`. The
implementation of Peridynamics in LAMMPS is described in :ref:`(Parks)
<Parks>`. Also see the `PDLAMMPS user guide
<http://www.sandia.gov/~mlparks/papers/PDLAMMPS.pdf>`_ for more details
about its implementation.
<https://download.lammps.org/pdfs/PDLAMMPS_user_guide.pdf>`_ for more
details about its implementation.
The peridynamic VES and EPS models in PDLAMMPS were implemented by
R. Rahman and J. T. Foster at University of Texas at San Antonio. The
@ -169,8 +168,9 @@ shift option.
The :doc:`pair_modify <pair_modify>` table and tail options are not
relevant for these pair styles.
These pair styles write their information to :doc:`binary restart files <restart>`, so pair_style and pair_coeff commands do not need
to be specified in an input script that reads a restart file.
These pair styles write their information to :doc:`binary restart files
<restart>`, so pair_style and pair_coeff commands do not need to be
specified in an input script that reads a restart file.
These pair styles can only be used via the *pair* keyword of the
:doc:`run_style respa <run_style>` command. They do not support the
@ -181,8 +181,9 @@ These pair styles can only be used via the *pair* keyword of the
Restrictions
""""""""""""
All of these styles are part of the PERI package. They are only
enabled if LAMMPS was built with that package. See the :doc:`Build package <Build_package>` page for more info.
All of these styles are part of the PERI package. They are only enabled
if LAMMPS was built with that package. See the :doc:`Build package
<Build_package>` page for more info.
Related commands
""""""""""""""""