update dependencies for USER-CGSDK package. make script permissions consistent

2018-05-09 16:13:54 -04:00
parent 8697cac6aa
commit a7a83b118d
31 changed files with 3 additions and 4 deletions
--- a/src/COMPRESS/Install.sh
+++ b/src/COMPRESS/Install.sh
--- a/src/CORESHELL/Install.sh
+++ b/src/CORESHELL/Install.sh
--- a/src/Depend.sh
+++ b/src/Depend.sh
@ -96,9 +96,8 @@ if (test $1 = "MOLECULE") then
  depend GPU
  depend KOKKOS
  depend USER-MISC
-  depend USER-OMP
  depend USER-FEP
-  depend USER-CGDNA
+  depend USER-OMP
  depend USER-INTEL
 fi

--- a/src/GPU/Install.sh
+++ b/src/GPU/Install.sh
--- a/src/Install.sh
+++ b/src/Install.sh
--- a/src/KIM/Install.sh
+++ b/src/KIM/Install.sh
--- a/src/KOKKOS/Install.sh
+++ b/src/KOKKOS/Install.sh
--- a/src/LATTE/Install.sh
+++ b/src/LATTE/Install.sh
--- a/src/MEAM/Install.sh
+++ b/src/MEAM/Install.sh
--- a/src/MPIIO/Install.sh
+++ b/src/MPIIO/Install.sh
--- a/src/Make.sh
+++ b/src/Make.sh
--- a/src/OPT/Install.sh
+++ b/src/OPT/Install.sh
--- a/src/POEMS/Install.sh
+++ b/src/POEMS/Install.sh
--- a/src/Package.sh
+++ b/src/Package.sh
--- a/src/QEQ/Install.sh
+++ b/src/QEQ/Install.sh
--- a/src/REAX/Install.sh
+++ b/src/REAX/Install.sh
--- a/src/USER-AWPMD/Install.sh
+++ b/src/USER-AWPMD/Install.sh
--- a/src/USER-CGDNA/Install.sh
+++ b/src/USER-CGDNA/Install.sh
--- a/src/USER-CGSDK/Install.sh
+++ b/src/USER-CGSDK/Install.sh
@ -28,8 +28,8 @@ action () {

 # list of files with optional dependcies

-action angle_sdk.cpp angle_harmonic.cpp
-action angle_sdk.h angle_harmonic.cpp
+action angle_sdk.cpp
+action angle_sdk.h
 action lj_sdk_common.h
 action pair_lj_sdk.cpp
 action pair_lj_sdk.h
--- a/src/USER-FEP/Install.sh
+++ b/src/USER-FEP/Install.sh
--- a/src/USER-H5MD/Install.sh
+++ b/src/USER-H5MD/Install.sh
--- a/src/USER-INTEL/Install.sh
+++ b/src/USER-INTEL/Install.sh
--- a/src/USER-MISC/Install.sh
+++ b/src/USER-MISC/Install.sh
--- a/src/USER-MOLFILE/Install.sh
+++ b/src/USER-MOLFILE/Install.sh
--- a/src/USER-NETCDF/Install.sh
+++ b/src/USER-NETCDF/Install.sh
--- a/src/USER-OMP/Install.sh
+++ b/src/USER-OMP/Install.sh
--- a/src/USER-OMP/hack_openmp_for_pgi.sh
+++ b/src/USER-OMP/hack_openmp_for_pgi.sh
--- a/src/USER-PHONON/Install.sh
+++ b/src/USER-PHONON/Install.sh
--- a/src/USER-QUIP/Install.sh
+++ b/src/USER-QUIP/Install.sh
--- a/src/USER-SMD/Install.sh
+++ b/src/USER-SMD/Install.sh
--- a/src/USER-VTK/Install.sh
+++ b/src/USER-VTK/Install.sh