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git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3534 f3b2605a-c512-4ea7-a41b-209d697bcdaa

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sjplimp
2009-12-15 16:27:48 +00:00
parent 18f7ebff4f
commit ade7db8e31
2 changed files with 20 additions and 10 deletions
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15
doc/fix_ave_histo.html
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@ -28,9 +28,9 @@ lo,hi = lo/hi bounds within which to histogram
Nbin = # of histogram bins
one or more input values can be listed
<LI>value = c_ID, c_ID[N], f_ID, f_ID[N], v_name
<LI>value = x, y, z, vx, vy, vz, fx, fy, fz, c_ID, c_ID[N], f_ID, f_ID[N], v_name
<PRE> c_ID = scalar or vector calculated by a compute with ID
<PRE> x,y,z,vx,vy,vz,fx,fy,fz = atom attribute (position, velocity, force component)c_ID = scalar or vector calculated by a compute with ID
c_ID[I] = Ith component of vector or Ith column of array calculated by a compute with ID
f_ID = scalar or vector calculated by a fix with ID
f_ID[I] = Ith component of vector or Ith column of array calculated by a fix with ID
@ -87,7 +87,8 @@ a histogram bin. <I>Nbins</I> are defined, with even spacing between <I>lo</I>
and <I>hi</I>. Values that fall outside the lo/hi bounds can be treated in
different ways; see the discussion of the <I>beyond</I> keyword below.
</P>
<P>Each input value can be the result of a <A HREF = "compute.html">compute</A> or
<P>Each input value can be an atom attribute (position, velocity, force
component) or can be the result of a <A HREF = "compute.html">compute</A> or
<A HREF = "fix.html">fix</A> or the evaluation of an equal-style or atom-style
<A HREF = "variable.html">variable</A>. The set of input values can be either all
global, all per-atom, or all local quantities. Inputs of different
@ -95,8 +96,9 @@ kinds (e.g. global and per-atom) cannot be mixed. The input values
must also be either all scalar or all vector values, depending on the
setting of the <I>mode</I> keyword.
</P>
<P>See the doc page for individual "compute" and "fix" commands to see
what kinds of quantities they generate.
<P>Atom attributes are per-atom vector values. See the doc page for
individual "compute" and "fix" commands to see what kinds of
quantities they generate.
</P>
<P>The output of this command is a single histogram for all input values
combined together, not one histogram per input value. See below for
@ -122,6 +124,9 @@ simply generated on timesteps 100,200,etc.
</P>
<HR>
<P>The atom attribute values (x,y,z,vx,vy,vz,fx,fy,fz) are
self-explanatory.
</P>
<P>If a value begins with "c_", a compute ID must follow which has been
previously defined in the input script. If <I>mode</I> = scalar, then if
no bracketed term is appended, the global scalar calculated by the

15
doc/fix_ave_histo.txt
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@ -20,8 +20,8 @@ Nfreq = calculate histogram every this many timesteps
lo,hi = lo/hi bounds within which to histogram
Nbin = # of histogram bins
one or more input values can be listed :l
value = c_ID, c_ID\[N\], f_ID, f_ID\[N\], v_name :l
c_ID = scalar or vector calculated by a compute with ID
value = x, y, z, vx, vy, vz, fx, fy, fz, c_ID, c_ID\[N\], f_ID, f_ID\[N\], v_name :l
x,y,z,vx,vy,vz,fx,fy,fz = atom attribute (position, velocity, force component)c_ID = scalar or vector calculated by a compute with ID
c_ID\[I\] = Ith component of vector or Ith column of array calculated by a compute with ID
f_ID = scalar or vector calculated by a fix with ID
f_ID\[I\] = Ith component of vector or Ith column of array calculated by a fix with ID
@ -75,7 +75,8 @@ a histogram bin. {Nbins} are defined, with even spacing between {lo}
and {hi}. Values that fall outside the lo/hi bounds can be treated in
different ways; see the discussion of the {beyond} keyword below.
Each input value can be the result of a "compute"_compute.html or
Each input value can be an atom attribute (position, velocity, force
component) or can be the result of a "compute"_compute.html or
"fix"_fix.html or the evaluation of an equal-style or atom-style
"variable"_variable.html. The set of input values can be either all
global, all per-atom, or all local quantities. Inputs of different
@ -83,8 +84,9 @@ kinds (e.g. global and per-atom) cannot be mixed. The input values
must also be either all scalar or all vector values, depending on the
setting of the {mode} keyword.
See the doc page for individual "compute" and "fix" commands to see
what kinds of quantities they generate.
Atom attributes are per-atom vector values. See the doc page for
individual "compute" and "fix" commands to see what kinds of
quantities they generate.
The output of this command is a single histogram for all input values
combined together, not one histogram per input value. See below for
@ -110,6 +112,9 @@ simply generated on timesteps 100,200,etc.
:line
The atom attribute values (x,y,z,vx,vy,vz,fx,fy,fz) are
self-explanatory.
If a value begins with "c_", a compute ID must follow which has been
previously defined in the input script. If {mode} = scalar, then if
no bracketed term is appended, the global scalar calculated by the