remove more duplicate semicolons

src/BODY/pair_body_rounded_polyhedron.cpp

@@ -1910,7 +1910,7 @@ void PairBodyRoundedPolyhedron::inside_polygon(int ibody, int face_index,
   iffirst = facfirst[ibody];
   rradi = rounded_radius[ibody];
   double rradsq = rradi*rradi;
-  anglesum1 = anglesum2 = 0;;
+  anglesum1 = anglesum2 = 0;
   for (i = 0; i < MAX_FACE_SIZE; i++) {
     npi1 = static_cast<int>(face[iffirst+face_index][i]);
     if (npi1 < 0) break;

src/CG-DNA/bond_oxdna_fene.cpp

@@ -146,7 +146,7 @@ void BondOxdnaFene::ev_tally_xyz(int i, int j, int nlocal, int newton_bond, doub
 void BondOxdnaFene::compute(int eflag, int vflag)
 {
   int a, b, in, type;
-  double delf[3], delta[3], deltb[3];    // force, torque increment;;
+  double delf[3], delta[3], deltb[3];    // force, torque increment
   double delr[3], ebond, fbond;
   double rsq, Deltasq, rlogarg;
   double r, rr0, rr0sq;

src/CG-DNA/pair_oxdna2_coaxstk.cpp

@@ -612,7 +612,7 @@ void PairOxdna2Coaxstk::coeff(int narg, char **arg)
         (0.5 * (cut_cxst_lo_one - cut_cxst_0_one) * (cut_cxst_lo_one - cut_cxst_0_one) -
         k_cxst_one * 0.5 * (cut_cxst_0_one -cut_cxst_c_one) * (cut_cxst_0_one - cut_cxst_c_one)/k_cxst_one);
 
-  cut_cxst_lc_one = cut_cxst_lo_one - 0.5 * (cut_cxst_lo_one - cut_cxst_0_one)/b_cxst_lo_one;;
+  cut_cxst_lc_one = cut_cxst_lo_one - 0.5 * (cut_cxst_lo_one - cut_cxst_0_one)/b_cxst_lo_one;
 
   b_cxst_hi_one = 0.25 * (cut_cxst_hi_one - cut_cxst_0_one) * (cut_cxst_hi_one - cut_cxst_0_one)/
         (0.5 * (cut_cxst_hi_one - cut_cxst_0_one) * (cut_cxst_hi_one - cut_cxst_0_one) -

src/CG-DNA/pair_oxdna2_dh.cpp

@@ -79,7 +79,7 @@ void PairOxdna2Dh::compute_interaction_sites(double e1[3],
 
 void PairOxdna2Dh::compute(int eflag, int vflag)
 {
-  double delf[3],delta[3],deltb[3]; // force, torque increment;;
+  double delf[3],delta[3],deltb[3]; // force, torque increment
   double rtmp_s[3],delr[3];
   double evdwl,fpair,factor_lj;
   double r,rsq,rinv;

src/CG-DNA/pair_oxdna_coaxstk.cpp

@@ -749,7 +749,7 @@ void PairOxdnaCoaxstk::coeff(int narg, char **arg)
         (0.5 * (cut_cxst_lo_one - cut_cxst_0_one) * (cut_cxst_lo_one - cut_cxst_0_one) -
         k_cxst_one * 0.5 * (cut_cxst_0_one -cut_cxst_c_one) * (cut_cxst_0_one - cut_cxst_c_one)/k_cxst_one);
 
-  cut_cxst_lc_one = cut_cxst_lo_one - 0.5 * (cut_cxst_lo_one - cut_cxst_0_one)/b_cxst_lo_one;;
+  cut_cxst_lc_one = cut_cxst_lo_one - 0.5 * (cut_cxst_lo_one - cut_cxst_0_one)/b_cxst_lo_one;
 
   b_cxst_hi_one = 0.25 * (cut_cxst_hi_one - cut_cxst_0_one) * (cut_cxst_hi_one - cut_cxst_0_one)/
         (0.5 * (cut_cxst_hi_one - cut_cxst_0_one) * (cut_cxst_hi_one - cut_cxst_0_one) -

src/CG-DNA/pair_oxdna_xstk.cpp

@@ -696,7 +696,7 @@ void PairOxdnaXstk::coeff(int narg, char **arg)
         (0.5 * (cut_xst_lo_one - cut_xst_0_one) * (cut_xst_lo_one - cut_xst_0_one) -
         k_xst_one * 0.5 * (cut_xst_0_one -cut_xst_c_one) * (cut_xst_0_one - cut_xst_c_one)/k_xst_one);
 
-  cut_xst_lc_one = cut_xst_lo_one - 0.5 * (cut_xst_lo_one - cut_xst_0_one)/b_xst_lo_one;;
+  cut_xst_lc_one = cut_xst_lo_one - 0.5 * (cut_xst_lo_one - cut_xst_0_one)/b_xst_lo_one;
 
   b_xst_hi_one = 0.25 * (cut_xst_hi_one - cut_xst_0_one) * (cut_xst_hi_one - cut_xst_0_one)/
         (0.5 * (cut_xst_hi_one - cut_xst_0_one) * (cut_xst_hi_one - cut_xst_0_one) -

src/CG-DNA/pair_oxrna2_xstk.cpp

@@ -639,7 +639,7 @@ void PairOxrna2Xstk::coeff(int narg, char **arg)
         (0.5 * (cut_xst_lo_one - cut_xst_0_one) * (cut_xst_lo_one - cut_xst_0_one) -
         k_xst_one * 0.5 * (cut_xst_0_one -cut_xst_c_one) * (cut_xst_0_one - cut_xst_c_one)/k_xst_one);
 
-  cut_xst_lc_one = cut_xst_lo_one - 0.5 * (cut_xst_lo_one - cut_xst_0_one)/b_xst_lo_one;;
+  cut_xst_lc_one = cut_xst_lo_one - 0.5 * (cut_xst_lo_one - cut_xst_0_one)/b_xst_lo_one;
 
   b_xst_hi_one = 0.25 * (cut_xst_hi_one - cut_xst_0_one) * (cut_xst_hi_one - cut_xst_0_one)/
         (0.5 * (cut_xst_hi_one - cut_xst_0_one) * (cut_xst_hi_one - cut_xst_0_one) -

src/EXTRA-COMPUTE/compute_adf.cpp

@@ -288,7 +288,7 @@ void ComputeADF::init()
     rcutinnerk[0] = 0.0;
     rcutouterj[0] = force->pair->cutforce;
     rcutouterk[0] = force->pair->cutforce;
-    maxouter = force->pair->cutforce;;
+    maxouter = force->pair->cutforce;
   } else {
     for (int m = 0; m < ntriples; m++) {
       maxouter = MAX(rcutouterj[m],maxouter);

src/EXTRA-DUMP/dump_xtc.cpp

@@ -1046,7 +1046,7 @@ int xdr3dfcoord(XDR *xdrs, float *fp, int *size, float *precision)
         sizesmall[0] = sizesmall[1] = sizesmall[2] = magicints[smallidx];
       }
     }
-    if (buf[1] != 0) buf[0]++;;
+    if (buf[1] != 0) buf[0]++;
     xdr_int(xdrs, &(buf[0])); /* buf[0] holds the length in bytes */
     return errval * (xdr_opaque(xdrs, (caddr_t)&(buf[3]), (u_int)buf[0]));
   } else {

src/EXTRA-FIX/fix_wall_ees.cpp

@@ -116,7 +116,7 @@ void FixWallEES::wall_particle(int m, int which, double coord)
       nhat[(dim+2)%3] = 0 ;
 
 
-      double* shape = bonus[ellipsoid[i]].shape;;
+      double* shape = bonus[ellipsoid[i]].shape;
       MathExtra::quat_to_mat(bonus[ellipsoid[i]].quat,A);
       MathExtra::transpose_matvec(A,nhat,tempvec);
       for (int k = 0; k<3; k++) {

src/INTEL/npair_full_bin_intel.cpp

@@ -62,7 +62,7 @@ fbi(NeighList *list, IntelBuffers<flt_t,acc_t> *buffers) {
   list->inum = nlocal;
   list->gnum = 0;
 
-  int host_start = _fix->host_start_neighbor();;
+  int host_start = _fix->host_start_neighbor();
   const int off_end = _fix->offload_end_neighbor();
 
   #ifdef _LMP_INTEL_OFFLOAD

src/INTEL/pppm_disp_intel.cpp

@@ -1478,7 +1478,7 @@ void PPPMDispIntel::fieldforce_c_ik(IntelBuffers<flt_t,acc_t> * /*buffers*/)
 
       int nxsum = nx + nlower;
       int nysum = ny + nlower;
-      int nzsum = nz + nlower;;
+      int nzsum = nz + nlower;
 
       FFT_SCALAR dx = nx+fshiftone - (x[i][0]-lo0)*xi;
       FFT_SCALAR dy = ny+fshiftone - (x[i][1]-lo1)*yi;

src/KOKKOS/atom_vec_dpd_kokkos.cpp

@@ -116,22 +116,22 @@ void AtomVecDPDKokkos::grow_pointers()
   d_dpdTheta = atomKK->k_dpdTheta.d_view;
   h_dpdTheta = atomKK->k_dpdTheta.h_view;
   uCond = atomKK->uCond;
-  d_uCond = atomKK->k_uCond.d_view;;
+  d_uCond = atomKK->k_uCond.d_view;
   h_uCond = atomKK->k_uCond.h_view;
   uMech = atomKK->uMech;
-  d_uMech = atomKK->k_uMech.d_view;;
+  d_uMech = atomKK->k_uMech.d_view;
   h_uMech = atomKK->k_uMech.h_view;
   uChem = atomKK->uChem;
-  d_uChem = atomKK->k_uChem.d_view;;
+  d_uChem = atomKK->k_uChem.d_view;
   h_uChem = atomKK->k_uChem.h_view;
   uCG = atomKK->uCG;
-  d_uCG = atomKK->k_uCG.d_view;;
+  d_uCG = atomKK->k_uCG.d_view;
   h_uCG = atomKK->k_uCG.h_view;
   uCGnew = atomKK->uCGnew;
-  d_uCGnew = atomKK->k_uCGnew.d_view;;
+  d_uCGnew = atomKK->k_uCGnew.d_view;
   h_uCGnew = atomKK->k_uCGnew.h_view;
   duChem = atomKK->duChem;
-  d_duChem = atomKK->k_duChem.d_view;;
+  d_duChem = atomKK->k_duChem.d_view;
   h_duChem = atomKK->k_duChem.h_view;
 }
 

src/KOKKOS/dihedral_harmonic_kokkos.cpp

@@ -265,9 +265,9 @@ void DihedralHarmonicKokkos<DeviceType>::operator()(TagDihedralHarmonicCompute<N
 
   const F_FLOAT df = -d_k[type] * df1;
 
-  const F_FLOAT sx2  = df*dtgx;;
+  const F_FLOAT sx2  = df*dtgx;
-  const F_FLOAT sy2  = df*dtgy;;
+  const F_FLOAT sy2  = df*dtgy;
-  const F_FLOAT sz2  = df*dtgz;;
+  const F_FLOAT sz2  = df*dtgz;
 
   F_FLOAT f1[3],f2[3],f3[3],f4[3];
   f1[0] = df*dtfx;

src/KOKKOS/fix_wall_gran_old.cpp

@@ -1470,7 +1470,7 @@ void FixWallGranOld::granular(double rsq, double dx, double dy, double dz,
   if (twist_model != TWIST_NONE) {
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
     if (twist_model == TWIST_MARSHALL) {
-      k_twist = 0.5*k_tangential*a*a;; // eq 32 of Marshall paper
+      k_twist = 0.5*k_tangential*a*a; // eq 32 of Marshall paper
       damp_twist = 0.5*damp_tangential*a*a;
       mu_twist = TWOTHIRDS*a*tangential_coeffs[2];
     }

src/KSPACE/ewald.cpp

@@ -857,7 +857,7 @@ void Ewald::coeffs()
         vg[kcount][3] = -vterm*unitk[0]*k*unitk[1]*l;
         vg[kcount][4] = 0.0;
         vg[kcount][5] = 0.0;
-        kcount++;;
+        kcount++;
       }
     }
   }

src/KSPACE/pair_lj_charmmfsw_coul_long.cpp

@@ -230,7 +230,7 @@ void PairLJCharmmfswCoulLong::compute(int eflag, int vflag)
               evdwl12 = lj3[itype][jtype]*cut_lj6*denom_lj12 *
                 (r6inv - cut_lj6inv)*(r6inv - cut_lj6inv);
               evdwl6 = -lj4[itype][jtype]*cut_lj3*denom_lj6 *
-                (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
+                (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);
               evdwl = evdwl12 + evdwl6;
             } else {
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv -
@@ -588,7 +588,7 @@ void PairLJCharmmfswCoulLong::compute_outer(int eflag, int vflag)
               evdwl12 = lj3[itype][jtype]*cut_lj6*denom_lj12 *
                 (r6inv - cut_lj6inv)*(r6inv - cut_lj6inv);
               evdwl6 = -lj4[itype][jtype]*cut_lj3*denom_lj6 *
-                (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
+                (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);
               evdwl = evdwl12 + evdwl6;
             } else {
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv -
@@ -1015,7 +1015,7 @@ double PairLJCharmmfswCoulLong::single(int i, int j, int itype, int jtype,
       philj12 = lj3[itype][jtype]*cut_lj6*denom_lj12 *
         (r6inv - cut_lj6inv)*(r6inv - cut_lj6inv);
       philj6 = -lj4[itype][jtype]*cut_lj3*denom_lj6 *
-        (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
+        (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);
       philj = philj12 + philj6;
     } else {
       philj12 = r6inv*lj3[itype][jtype]*r6inv -

src/KSPACE/pppm.cpp

@@ -3004,7 +3004,7 @@ double PPPM::memory_usage()
 
   if (group_allocate_flag) {
     bytes += (double)2 * nbrick * sizeof(FFT_SCALAR);
-    bytes += (double)2 * nfft_both * sizeof(FFT_SCALAR);;
+    bytes += (double)2 * nfft_both * sizeof(FFT_SCALAR);
   }
 
   // two Grid3d bufs

src/KSPACE/pppm_disp.cpp

@@ -4651,7 +4651,7 @@ void PPPMDisp::poisson_ik(FFT_SCALAR* wk1, FFT_SCALAR* wk2,
       for (j = nylo_i; j <= nyhi_i; j++)
         for (i = nxlo_i; i <= nxhi_i; i++) {
           vz_brick[k][j][i] = wk2[n++];
-          u_pa[k][j][i] = -wk2[n++];;
+          u_pa[k][j][i] = -wk2[n++];
         }
   }
 

src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp

@@ -188,7 +188,7 @@ void PairLJCharmmfswCoulCharmmfsh::compute(int eflag, int vflag)
               evdwl12 = lj3[itype][jtype]*cut_lj6*denom_lj12 *
                 (r6inv - cut_lj6inv)*(r6inv - cut_lj6inv);
               evdwl6 = -lj4[itype][jtype]*cut_lj3*denom_lj6 *
-                (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
+                (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);
               evdwl = evdwl12 + evdwl6;
             } else {
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv -
@@ -525,7 +525,7 @@ single(int i, int j, int itype, int jtype,
       philj12 = lj3[itype][jtype]*cut_lj6*denom_lj12 *
         (r6inv - cut_lj6inv)*(r6inv - cut_lj6inv);
       philj6 = -lj4[itype][jtype]*cut_lj3*denom_lj6 *
-        (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
+        (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);
       philj = philj12 + philj6;
     } else {
       philj12 = r6inv*lj3[itype][jtype]*r6inv -

src/RIGID/fix_shake.cpp

@@ -877,7 +877,7 @@ void FixShake::find_clusters()
       tagprev = tag[i] - iatom - 1;
       npartner[i] = atommols[imol]->nspecial[iatom][0];
       for (j = 0; j < npartner[i]; j++)
-        partner_tag[i][j] = atommols[imol]->special[iatom][j] + tagprev;;
+        partner_tag[i][j] = atommols[imol]->special[iatom][j] + tagprev;
     }
   }
 

src/SMTBQ/pair_smtbq.cpp

@@ -204,7 +204,7 @@ PairSMTBQ::~PairSMTBQ()
   memory->destroy(potcov);
 
   memory->destroy(nvsm);
-  memory->destroy(vsm);;
+  memory->destroy(vsm);
   memory->destroy(flag_QEq);
 
   memory->destroy(nQEqall);

src/SPIN/min_spin_lbfgs.cpp

@@ -378,7 +378,7 @@ void MinSpinLBFGS::calc_search_direction()
       scaling = maximum_rotation(g_cur);
 
     for (int i = 0; i < 3 * nlocal; i++) {
-      p_s[i] = -g_cur[i] * factor * scaling;;
+      p_s[i] = -g_cur[i] * factor * scaling;
       g_old[i] = g_cur[i]  * factor;
       for (int k = 0; k < num_mem; k++) {
         ds[k][i] = 0.0;

src/fix_ave_grid.cpp

@@ -931,7 +931,7 @@ void FixAveGrid::atom2grid()
               vsq = v[i][0]*v[i][0] + v[i][1]*v[i][1] + v[i][2]*v[i][2];
               if (rmass) one = rmass[i];
               else one = mass[type[i]];
-              array2d[bin[i][0]][bin[i][1]][m] += one*vsq;;
+              array2d[bin[i][0]][bin[i][1]][m] += one*vsq;
             }
           }
       } else {

src/input.cpp

@@ -567,7 +567,7 @@ void Input::substitute(char *&str, char *&str2, int &max, int &max2, int flag)
   //   else $x becomes x followed by null char
   // beyond = points to text following variable
 
-  int i,n,paren_count,nchars;;
+  int i,n,paren_count,nchars;
   char immediate[256];
   char *var,*value,*beyond;
   int quoteflag = 0;

src/special.cpp

@@ -958,7 +958,7 @@ void Special::combine()
 
 void Special::angle_trim()
 {
-  int i,j,k,m;;
+  int i,j,k,m;
 
   int *num_angle = atom->num_angle;
   int *num_dihedral = atom->num_dihedral;