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update URLs for pizza.py homepage

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This commit is contained in:
Axel Kohlmeyer
2020-03-12 00:13:58 -04:00
parent 667c9f2a9f
commit e58aeebcce
9 changed files with 10 additions and 10 deletions
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2
doc/src/Howto_viz.rst
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@ -25,7 +25,7 @@ RasMol visualization programs. Pizza.py has tools that do interactive
3d OpenGL visualization and one that creates SVG images of dump file 3d OpenGL visualization and one that creates SVG images of dump file
snapshots. snapshots.
.. _pizza: http://www.sandia.gov/~sjplimp/pizza.html .. _pizza: https://pizza.sandia.gov
.. _ensight: http://www.ensight.com .. _ensight: http://www.ensight.com

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doc/src/Intro_features.rst
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@ -187,7 +187,7 @@ Pre- and post-processing
plotting, and visualization for LAMMPS simulations. Pizza.py is plotting, and visualization for LAMMPS simulations. Pizza.py is
written in `Python <python_>`_ and is available for download from `the Pizza.py WWW site <pizza_>`_. written in `Python <python_>`_ and is available for download from `the Pizza.py WWW site <pizza_>`_.
.. _pizza: http://www.sandia.gov/~sjplimp/pizza.html .. _pizza: https://pizza.sandia.gov
.. _python: http://www.python.org .. _python: http://www.python.org

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doc/src/Intro_nonfeatures.rst
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@ -75,7 +75,7 @@ Here are suggestions on how to perform these tasks:
it easier to analyze and plot. See the :doc:`Tools <Tools>` doc page it easier to analyze and plot. See the :doc:`Tools <Tools>` doc page
for more discussion of the various tools. for more discussion of the various tools.
* **Pizza.py:** Our group has also written a separate toolkit called * **Pizza.py:** Our group has also written a separate toolkit called
`Pizza.py <http://pizza.sandia.gov>`_ which can do certain kinds of `Pizza.py <https://pizza.sandia.gov>`_ which can do certain kinds of
setup, analysis, plotting, and visualization (via OpenGL) for LAMMPS setup, analysis, plotting, and visualization (via OpenGL) for LAMMPS
simulations. It thus provides some functionality for several of the simulations. It thus provides some functionality for several of the
above bullets. Pizza.py is written in `Python <http://www.python.org>`_ above bullets. Pizza.py is written in `Python <http://www.python.org>`_

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doc/src/Python_examples.rst
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@ -36,7 +36,7 @@ visualization package you have installed.
Note that for GL, you need to be able to run the Pizza.py GL tool, Note that for GL, you need to be able to run the Pizza.py GL tool,
which is included in the pizza sub-directory. See the `Pizza.py doc pages <pizza_>`_ for more info: which is included in the pizza sub-directory. See the `Pizza.py doc pages <pizza_>`_ for more info:
.. _pizza: http://www.sandia.gov/~sjplimp/pizza.html .. _pizza: https://pizza.sandia.gov
Note that for AtomEye, you need version 3, and there is a line in the Note that for AtomEye, you need version 3, and there is a line in the
scripts that specifies the path and name of the executable. See the scripts that specifies the path and name of the executable. See the

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doc/src/Tools.rst
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@ -15,7 +15,7 @@ Sandia which provides tools for doing setup, analysis, plotting, and
visualization for LAMMPS simulations. visualization for LAMMPS simulations.
.. _lws: http://lammps.sandia.gov .. _lws: http://lammps.sandia.gov
.. _pizza: http://pizza.sandia.gov .. _pizza: https://pizza.sandia.gov
.. _python: http://www.python.org .. _python: http://www.python.org
Additional tools included in the LAMMPS distribution are described on Additional tools included in the LAMMPS distribution are described on

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doc/src/balance.rst
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@ -542,6 +542,6 @@ Related commands
:doc:`group <group>`, :doc:`processors <processors>`, :doc:`group <group>`, :doc:`processors <processors>`,
:doc:`fix balance <fix_balance>`, :doc:`comm_style <comm_style>` :doc:`fix balance <fix_balance>`, :doc:`comm_style <comm_style>`
.. _pizza: http://pizza.sandia.gov .. _pizza: https://pizza.sandia.gov
**Default:** none **Default:** none

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doc/src/dump.rst
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@ -221,7 +221,7 @@ individual values and the file itself.
The *atom*\ , *local*\ , and *custom* styles create files in a simple text The *atom*\ , *local*\ , and *custom* styles create files in a simple text
format that is self-explanatory when viewing a dump file. Some of the format that is self-explanatory when viewing a dump file. Some of the
LAMMPS post-processing tools described on the :doc:`Tools <Tools>` doc LAMMPS post-processing tools described on the :doc:`Tools <Tools>` doc
page, including `Pizza.py <http://www.sandia.gov/~sjplimp/pizza.html>`_, page, including `Pizza.py <https://pizza.sandia.gov>`_,
work with this format, as does the :doc:`rerun <rerun>` command. work with this format, as does the :doc:`rerun <rerun>` command.
For post-processing purposes the *atom*\ , *local*\ , and *custom* text For post-processing purposes the *atom*\ , *local*\ , and *custom* text

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doc/src/dump_image.rst
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@ -601,8 +601,8 @@ Play the movie:
% mplayer foo.mpg % mplayer foo.mpg
% ffplay bar.avi % ffplay bar.avi
* c) Use the `Pizza.py <http://www.sandia.gov/~sjplimp/pizza.html>`_ * c) Use the `Pizza.py <https://pizza.sandia.gov>`_
`animate tool <http://www.sandia.gov/~sjplimp/pizza/doc/animate.html>`_, `animate tool <https://pizza.sandia.gov/doc/animate.html>`_,
which works directly on a series of image files. which works directly on a series of image files.
.. code-block:: python .. code-block:: python

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doc/src/fix_balance.rst
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@ -403,6 +403,6 @@ Related commands
:doc:`group <group>`, :doc:`processors <processors>`, :doc:`balance <balance>`, :doc:`group <group>`, :doc:`processors <processors>`, :doc:`balance <balance>`,
:doc:`comm_style <comm_style>` :doc:`comm_style <comm_style>`
.. _pizza: http://pizza.sandia.gov .. _pizza: https://pizza.sandia.gov
**Default:** none **Default:** none