update URLs for pizza.py homepage
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@ -25,7 +25,7 @@ RasMol visualization programs. Pizza.py has tools that do interactive
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3d OpenGL visualization and one that creates SVG images of dump file
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snapshots.
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.. _pizza: http://www.sandia.gov/~sjplimp/pizza.html
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.. _pizza: https://pizza.sandia.gov
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.. _ensight: http://www.ensight.com
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@ -187,7 +187,7 @@ Pre- and post-processing
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plotting, and visualization for LAMMPS simulations. Pizza.py is
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written in `Python <python_>`_ and is available for download from `the Pizza.py WWW site <pizza_>`_.
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.. _pizza: http://www.sandia.gov/~sjplimp/pizza.html
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.. _pizza: https://pizza.sandia.gov
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.. _python: http://www.python.org
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@ -75,7 +75,7 @@ Here are suggestions on how to perform these tasks:
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it easier to analyze and plot. See the :doc:`Tools <Tools>` doc page
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for more discussion of the various tools.
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* **Pizza.py:** Our group has also written a separate toolkit called
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`Pizza.py <http://pizza.sandia.gov>`_ which can do certain kinds of
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`Pizza.py <https://pizza.sandia.gov>`_ which can do certain kinds of
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setup, analysis, plotting, and visualization (via OpenGL) for LAMMPS
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simulations. It thus provides some functionality for several of the
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above bullets. Pizza.py is written in `Python <http://www.python.org>`_
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@ -36,7 +36,7 @@ visualization package you have installed.
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Note that for GL, you need to be able to run the Pizza.py GL tool,
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which is included in the pizza sub-directory. See the `Pizza.py doc pages <pizza_>`_ for more info:
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.. _pizza: http://www.sandia.gov/~sjplimp/pizza.html
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.. _pizza: https://pizza.sandia.gov
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Note that for AtomEye, you need version 3, and there is a line in the
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scripts that specifies the path and name of the executable. See the
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@ -15,7 +15,7 @@ Sandia which provides tools for doing setup, analysis, plotting, and
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visualization for LAMMPS simulations.
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.. _lws: http://lammps.sandia.gov
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.. _pizza: http://pizza.sandia.gov
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.. _pizza: https://pizza.sandia.gov
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.. _python: http://www.python.org
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Additional tools included in the LAMMPS distribution are described on
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@ -542,6 +542,6 @@ Related commands
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:doc:`group <group>`, :doc:`processors <processors>`,
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:doc:`fix balance <fix_balance>`, :doc:`comm_style <comm_style>`
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.. _pizza: http://pizza.sandia.gov
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.. _pizza: https://pizza.sandia.gov
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**Default:** none
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@ -221,7 +221,7 @@ individual values and the file itself.
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The *atom*\ , *local*\ , and *custom* styles create files in a simple text
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format that is self-explanatory when viewing a dump file. Some of the
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LAMMPS post-processing tools described on the :doc:`Tools <Tools>` doc
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page, including `Pizza.py <http://www.sandia.gov/~sjplimp/pizza.html>`_,
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page, including `Pizza.py <https://pizza.sandia.gov>`_,
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work with this format, as does the :doc:`rerun <rerun>` command.
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For post-processing purposes the *atom*\ , *local*\ , and *custom* text
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@ -601,8 +601,8 @@ Play the movie:
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% mplayer foo.mpg
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% ffplay bar.avi
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* c) Use the `Pizza.py <http://www.sandia.gov/~sjplimp/pizza.html>`_
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`animate tool <http://www.sandia.gov/~sjplimp/pizza/doc/animate.html>`_,
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* c) Use the `Pizza.py <https://pizza.sandia.gov>`_
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`animate tool <https://pizza.sandia.gov/doc/animate.html>`_,
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which works directly on a series of image files.
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.. code-block:: python
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@ -403,6 +403,6 @@ Related commands
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:doc:`group <group>`, :doc:`processors <processors>`, :doc:`balance <balance>`,
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:doc:`comm_style <comm_style>`
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.. _pizza: http://pizza.sandia.gov
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.. _pizza: https://pizza.sandia.gov
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**Default:** none
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