Commit Graph

16248 Commits

Author SHA1 Message Date
037e91f77f updated documentation for inclusion of airebo/morse 2016-03-15 17:27:37 -04:00
d4f5612904 pair style rebo/morse makes no sense. removed. 2016-03-15 17:27:06 -04:00
906ebc261e Integrate AIREBO-M by merging it into regular AIREBO and building wrapper classes 2016-03-15 16:39:31 -04:00
1a9f4dbcef prepare for merging in AIREBO-M code 2016-03-15 14:37:51 -04:00
21163ae28b it is bad practice to overwrite members from other classes, and not needed here anyway. 2016-03-15 11:49:04 -04:00
c874ec86df Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
# Resolved Conflicts:
#	doc/Manual.txt
2016-03-15 06:33:59 -04:00
5d2a0214fa remove debug printf()s. 2016-03-14 19:54:03 -04:00
b760ca8038 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14750 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-14 19:11:28 +00:00
a59445d4b7 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14749 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-14 19:10:32 +00:00
93e451b594 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14748 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-14 19:06:38 +00:00
ec42f2530c git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14747 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-14 18:46:42 +00:00
ad3c57cb63 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14746 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-14 18:45:25 +00:00
61c0608ffa git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14745 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-14 18:45:15 +00:00
16b9206d98 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14744 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-14 18:44:45 +00:00
92ef1cb060 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14743 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-14 18:44:13 +00:00
2e3032723c git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14742 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-14 18:41:57 +00:00
66b282b36d git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14741 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-14 18:41:39 +00:00
e02c66b932 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14740 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-14 18:40:28 +00:00
3aa052628c update ccache settings for TravisCI as described in docs 2016-03-13 07:20:06 -04:00
ef01d1b840 correctly identify rigid and rigid/small derived fixes in compute */rigid 2016-03-13 07:04:54 -04:00
6eb1ade2f0 add simple test for newly added compute bond command 2016-03-12 20:31:55 -05:00
b154a21d50 add a compute bond that allows accessing per sub-style bond energies. 2016-03-12 20:25:32 -05:00
ca56f521f4 adapt attribution to usual LAMMPS style 2016-03-11 17:00:24 -05:00
6be61b0803 Merge branch 'merge-pull-38' into lammps-icms 2016-03-11 16:56:33 -05:00
c80fb4b8ea Merge branch 'pair-morse-smooth-linear-omp' of https://github.com/Pakketeretet2/lammps into merge-pull-38 2016-03-11 16:54:43 -05:00
b6355a0772 Done making changes. 2016-03-11 16:39:50 -05:00
739b14fae0 remove obsolete code 2016-03-11 15:43:22 -05:00
8d48e2b419 Merge branch 'merge-pull-37' into lammps-icms 2016-03-11 11:10:09 -05:00
d654d83686 also mention the OpenMP version 2016-03-11 11:09:04 -05:00
3d506cf5b3 restore unchanged doc/pair_thole.html file. will be updated upstream. 2016-03-11 11:05:22 -05:00
b17f6a1590 Docs on lj/cut/thole/long 2016-03-11 15:29:19 +01:00
162222a62c Merge pull request #1 from lammps/lammps-icms
Resync with upstream
2016-03-11 15:22:17 +01:00
e58b10fa81 fix bug in lj/charmm/coul/charmm reported on lammps-users 2016-03-11 08:45:28 -05:00
32123d875f forgot file with dependencies 2016-03-11 07:18:33 -05:00
e14762f7a1 provide explicit dependencies in lib/meam for parallel make 2016-03-11 07:10:21 -05:00
89811fe1e0 parallel make tries to run tests in paralle, too. not good. 2016-03-11 07:06:12 -05:00
b0ffa46a3b adapt personal makefiles to the new location of fastdep 2016-03-11 06:48:01 -05:00
bce9b641f4 remove duplicate copy of fastdep tool. 2016-03-11 06:45:45 -05:00
1cf0e40793 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
#Resolved Conflicts:
#	doc/Manual.txt
#	src/MAKE/MACHINES/Makefile.mingw32-cross
#	src/MAKE/MACHINES/Makefile.mingw32-cross-mpi
#	src/MAKE/MACHINES/Makefile.mingw64-cross
#	src/MAKE/MACHINES/Makefile.mingw64-cross-mpi
#	src/MAKE/MINE/Makefile.g++
#	src/MAKE/Makefile.mpi
#	src/MAKE/Makefile.serial
#	src/Make.py
#	src/Makefile
2016-03-11 06:45:09 -05:00
93af809806 reduce 4 MPI tasks to 2 to for docker based TravisCI. try to use parallel make. 2016-03-10 23:45:28 -05:00
575daec08f try to disable MPI processor affinity in order to speed up running on oversubscribed virtual machines 2016-03-10 23:12:35 -05:00
e45ca540e0 try different strategy to avoid unexpected deadlocks with MPI+OpenMP when oversubscribing build nodes. 2016-03-10 22:47:18 -05:00
dd738827fa fix parallel deadlock bug in dvd and xtc dumps with > 2^31 timesteps reported by chris macdermaid. 2016-03-10 22:43:34 -05:00
a946de0b03 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14738 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-10 16:57:36 +00:00
7c9022e3d5 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14737 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-10 16:56:40 +00:00
f5ceb5b292 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14736 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-10 16:34:30 +00:00
109b9bab28 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14735 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-10 16:31:34 +00:00
f620bcc4f9 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14734 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-10 16:30:39 +00:00
c954b454ba disable another test that fails with 4xMPI+1xOpenMP 2016-03-10 11:24:51 -05:00
047c55383a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14732 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-03-10 16:13:43 +00:00