Commit Graph

22697 Commits

Author SHA1 Message Date
dd61ac80f7 simplify lammps.cpp using {fmt} and utils::logmesg() 2020-05-27 04:52:21 -04:00
b208e39ba7 remove obsolete c++98 workaround warning 2020-05-27 04:30:12 -04:00
29bd22a7ea add tests for eam/cd and eim 2020-05-26 21:08:39 -04:00
7f699e9233 fix verbosity handling issue in pair style tests 2020-05-26 21:08:26 -04:00
2e3f03f9ca remove pair style eam/cd/omp which seems broken beyond repair 2020-05-26 20:55:57 -04:00
e01e72cc8e Formatting 2020-05-26 20:29:09 -04:00
5e4ce8d03c Use Error::one in PotentialFileReader 2020-05-26 20:27:16 -04:00
13942a4d20 Use PotentialFileReader in PairComb 2020-05-26 20:23:28 -04:00
c302c0bca2 Add PotentialFileReader and use it in PairSW 2020-05-26 20:10:48 -04:00
541ab46e97 add tests for comb and comb3 2020-05-26 19:58:24 -04:00
ff3ebd4f6a fix two memory allocation/deallocation bugs in pair style comb3 2020-05-26 19:56:28 -04:00
151d1fb42b cosmetic updates 2020-05-26 19:55:54 -04:00
f1685afaa7 correct logic and also skip for USER-OMP 2020-05-26 18:42:47 -04:00
c91cad5155 add test for bop 2020-05-26 18:36:33 -04:00
0f8ff07da2 skip over newton_pair == off tests if newton_pair is forced to be on 2020-05-26 18:36:22 -04:00
dff78c19aa add tests for pair styles adp, atm, sw and tersoff and new data/input 2020-05-26 18:22:21 -04:00
74249380ec Add count method to ValueTokenizer 2020-05-26 16:30:46 -04:00
4a2ddb2c5e restore required header 2020-05-26 15:22:03 -04:00
b5b71bbb92 (re-)add example uses of {fmt} 2020-05-26 15:16:35 -04:00
56cb761b04 add fmtlib as copy. too many complications from keeping it in a separate dir. 2020-05-26 15:15:53 -04:00
5d6c18dbed one more correction for cmake --build 2020-05-26 12:29:03 -04:00
31a3e84950 correct documentation about cmake --build with targets 2020-05-26 12:26:44 -04:00
bc5c267630 Reverted to using a threshold much smaller than 1e-6 for zero inertia moments 2020-05-25 23:37:49 -05:00
042cfc521b cmake: allow to overwrite GTest URL for offline machines 2020-05-24 19:38:19 -06:00
18320ded89 image correction for fragment location 2020-05-24 14:47:50 -06:00
375fb4b314 bond/react: change 'general name' for method
and update contact info
2020-05-23 23:32:49 -06:00
faec8ac2be correctly update dihedral constraint 2020-05-23 23:22:56 -06:00
60e0a8a6a8 Update fix_bond_react.rst 2020-05-23 23:12:16 -06:00
4250def29a dihedral constraint: fragment support 2020-05-23 22:58:37 -06:00
093f981719 Improved the way body inertia moments are checked if they are zero when updating body quaterions in fix rigid/nve 2020-05-23 23:52:00 -05:00
74d58778b4 angle constraint: fragment support 2020-05-23 22:29:14 -06:00
a64a9c1253 distance constraint: fragment support 2020-05-23 22:13:20 -06:00
6d11515ad0 scale factors in constructor only. Issue with successive fresh runs 2020-05-22 14:35:32 -05:00
1add74b8f7 save diameter and charge scale for restart. Need a switch te default values to 1 during init 2020-05-22 14:04:51 -05:00
5e3fe19756 Merge pull request #2101 from rbberger/unittest_compilation_bugfix
Make sure include directories are passed to test binaries
2020-05-21 15:45:05 -04:00
73b537f6c3 Make sure include directories are passed to test binaries 2020-05-21 15:06:08 -04:00
8de046270e Merge pull request #2100 from akohlmey/respa-related-fixes-and-unittest
Add basic unit test for r-RESPA and some related bugfixes
2020-05-21 13:09:37 -04:00
8e92530e79 add code owners for unit tests 2020-05-21 11:34:15 -04:00
4f44159d56 add a test for r-RESPA (only with newton on and for plain styles for now) 2020-05-21 11:17:49 -04:00
0788a8ee4f only collect the per-atom data specific to this test to compare against total pe. 2020-05-21 11:06:11 -04:00
799b676f89 must skip corresponding per-atom data accumulation if compute_flag for pair or kspace is 0 2020-05-21 11:05:16 -04:00
2371db3242 add missing "reciprocal" 2020-05-21 07:41:07 -04:00
2dad3cbb2f update false positives list for time units correction to the docs 2020-05-21 01:37:11 -04:00
b8544de37b tweak error margin 2020-05-21 01:30:04 -04:00
f9e57392f3 properly honor verbose/no-verbose run flag 2020-05-21 01:14:02 -04:00
4eca3c46a6 fix bug that messes up r-RESPA from some strange reason. 2020-05-21 01:13:48 -04:00
e784afd60f use proper units (fmsec -> fs, psec -> ps and so on) 2020-05-21 01:13:15 -04:00
293bfa0485 fix typo 2020-05-21 01:13:03 -04:00
4868f5fdfc update 2020-05-20 22:04:00 -04:00
3d567c14ef Revert changes to be more C-like for Steve 2020-05-20 18:00:01 -04:00