Commit Graph

39680 Commits

Author SHA1 Message Date
16fabe83ae Merge branch 'develop' into kokkos-unit-testing 2024-07-27 03:27:35 -04:00
7396426963 Merge pull request #4183 from alphataubio/spica-kk
Add Kokkos version of spica pair and angle styles
2024-07-26 22:45:47 -04:00
2a99b9957d simplify and shorten charmmfsw example. add reference logs. 2024-07-26 19:34:23 -04:00
e7d338573f Merge branch 'develop' into spica-kk 2024-07-26 19:10:46 -04:00
cabde6549e add backward compatibility with inputs created before the rename of SDK to SPICA 2024-07-26 19:08:59 -04:00
1014cd1e0e Merge pull request #4211 from megmcca/kk_hybrid_topo_a-d-i
Port hybrid angle, dihedral, improper topology styles to Kokkos
2024-07-26 18:31:19 -04:00
e28de32a77 update docs, kk accel style 2024-07-26 13:06:17 -06:00
e317c18e1e whitespace 2024-07-26 12:57:22 -06:00
ce42418efc Merge branch 'lammps:develop' into kk_hybrid_topo_a-d-i 2024-07-26 12:56:27 -06:00
590c7dcf8f Merge branch 'lammps:develop' into spica-kk 2024-07-25 13:54:44 -04:00
90291a9b3a Merge pull request #4237 from Yi-FanLi/pimd_langevin_lj
fix pimd/langevin: improve usage of lj reduced units
2024-07-24 18:58:12 -04:00
fbd37bd5e9 Merge pull request #4235 from akohlmey/collected-small-fixes
LAMMPS GUI improvements
2024-07-24 00:04:24 -04:00
61c0001286 Merge pull request #4239 from lammps/occasional-neighbor-bug-fix
Bug fix for determining when an occasional neighbor list needs rebuilding
2024-07-23 22:37:51 -04:00
992b279b3a Merge branch 'develop' into pimd_langevin_lj 2024-07-23 21:34:30 -04:00
eaf875187c Fix bug in GPU/CPU overlap 2024-07-23 19:47:26 -04:00
ce0e513d8c Remove unused function 2024-07-23 17:42:23 -06:00
8bba2d12ec Fix bug in GPU/CPU overlap 2024-07-23 17:41:48 -06:00
c1c8525f4b fix typo in comment 2024-07-23 19:03:43 -04:00
91931f0ea2 Merge remote-tracking branch 'github/develop' into collected-small-fixes
# Conflicts:
#	doc/src/Tools.rst
2024-07-23 17:04:36 -04:00
afbcbc2dd6 Merge pull request #4238 from akohlmey/remove-lammps-shell
Remove lammps-shell tool as it has been superseded by LAMMPS-GUI
2024-07-23 14:58:40 -04:00
0210341489 whitespace 2024-07-23 05:09:33 -04:00
b459d0c9b9 apply clang-format 2024-07-22 23:58:10 -04:00
ed3ab86ba7 typo 2024-07-22 18:57:53 -04:00
d0528f7f02 Removing more obsolete args from nlist build_one() 2024-07-22 16:45:51 -06:00
572c511830 sanity check that occasionsal list is assigned to an NPair class 2024-07-22 14:37:13 -06:00
c6b7143863 whitespace around comment 2024-07-22 14:12:52 -06:00
445251d569 simplify logic for checking whether occasional neight list needs to be rebuilt 2024-07-22 14:11:04 -06:00
b551a8197f remove extra iteration 2024-07-22 10:57:49 -06:00
409e795027 remove extra iteration 2024-07-22 10:45:31 -06:00
9fd21fa065 Remove lammps-shell tool as it has been superseded by LAMMPS-GUI 2024-07-22 06:43:10 -04:00
70ee5495a2 mention dump_modify binary for VTK style dumps 2024-07-22 06:14:31 -04:00
1f14f36708 step patch level version 2024-07-21 19:11:01 -04:00
c05b184cca update documentation for file viewer feature 2024-07-21 19:10:15 -04:00
7dc0ace48f file viewer can be called from File menu or context menu in editor if word under cursor is a file 2024-07-21 18:37:06 -04:00
97ffabda0e add (text) file viewer class 2024-07-21 18:36:20 -04:00
c689cea7d8 initialize in constructor rather than header 2024-07-20 23:48:39 -04:00
9413bb825f match lj/spica/coul/long as close as possible to lj/cut/coul/long 2024-07-20 23:25:46 -04:00
49ead6be10 update doc 2024-07-20 22:46:06 -04:00
ce0fd7dcb7 initialize lj parameters to 1 2024-07-20 22:34:27 -04:00
063d5d2fcd keep entries in roughly alphabetical order 2024-07-20 03:35:04 -04:00
cf4654d9cf spelling 2024-07-18 19:07:59 -04:00
3017630c01 Merge remote-tracking branch 'github/develop' into collected-small-fixes 2024-07-18 18:40:22 -04:00
1ed6e153b6 Merge pull request #4214 from jtclemm/rheo
New multiphase fluids package
2024-07-18 18:38:51 -04:00
1c99d7f813 bugfix for extracting 2d-data with lammps_pair_extract() 2024-07-18 13:37:04 -04:00
517681eb1e avoid passing uninitialized data 2024-07-18 13:23:20 -04:00
3b022e86db add extract_pair_dimension and extract_pair for fortran module 2024-07-18 07:39:15 -04:00
bb005e1858 k_cut_ljsq and k_cut_coulsq 2024-07-18 04:24:40 -04:00
23f37e6f63 minor fixes 2024-07-18 03:53:44 -04:00
992987eb6a fix formatting to make diff easier 2024-07-18 00:27:35 -04:00
85beac7107 compatibility with Qt-5.12 and Ubuntu 20.04LTS 2024-07-18 00:16:12 -04:00