Commit Graph

20902 Commits

Author SHA1 Message Date
18c77db8c3 Add Kokkos vel methods 2020-05-07 15:16:17 -06:00
5db1e4fe8d Initialize variables since Kokkos doesn't call setup_fields 2020-05-07 13:19:12 -06:00
d69009ac45 Fix pointer delete issue with Kokkos package 2020-05-07 11:10:09 -06:00
cc18177153 Whitespace cleanup 2020-05-07 10:46:32 -06:00
3a23a97f64 Merge branch 'atomvec-custom' of github.com:lammps/lammps into atomvec-custom 2020-05-07 10:42:50 -06:00
71149768c6 fix atom_vec_hybrid bug 2020-05-07 10:42:40 -06:00
2b9a1a6982 Fix Kokkos runtime issue with special bonds 2020-05-07 10:35:08 -06:00
8ed5829d32 Merge branch 'atomvec-custom' of github.com:lammps/lammps into atomvec-custom 2020-05-06 16:25:22 -06:00
25632992f4 updates to USER-SPH example scripts 2020-05-06 16:25:07 -06:00
8301c7a9c6 Merge branch 'master' of ssh://github.com/lammps/lammps into atomvec-custom 2020-05-06 15:53:21 -06:00
7d9091cacc Add back in old hybrid functions, needed by Kokkos package 2020-05-06 15:49:44 -06:00
9e7765064c Merge branch 'atomvec-custom' of github.com:lammps/lammps into atomvec-custom 2020-05-06 15:28:41 -06:00
1225f7d1e0 small changes to examples scripts for regression purposes 2020-05-06 15:28:27 -06:00
14fb49c1cb Merge pull request #2068 from junghans/cmake_enable_chain.x
cmake: enable Fortran before checking for the compiler
2020-05-05 18:36:08 -04:00
fc7b1dc4fd Merge branch 'cmake_enable_chain.x' of github.com:junghans/lammps into cmake_enable_chain.x 2020-05-05 11:27:40 -04:00
b933538dfa tweak tbbmalloc search path for intel 19.1 compiler 2020-05-05 11:27:19 -04:00
8a114fca97 cmake: include where it is used 2020-05-05 08:53:49 -06:00
9708b58939 check for fortran instead of directly enabling it 2020-05-05 10:41:18 -04:00
bcd50646b4 don't enable fortran if the generator does not support it. 2020-05-05 10:23:04 -04:00
b5af7da2c6 cmake: enable Fortran before checking for the compiler 2020-05-05 07:10:42 -06:00
260e6bafd5 Merge pull request #2064 from akohlmey/next_lammps_version
Update version strings for the next patch release
patch_5May2020
2020-05-04 19:43:12 -04:00
1329603184 Merge pull request #2019 from z-gong/viscosity
Fix and compute styles for calculating viscosity with periodic perturbation method
2020-05-04 17:42:31 -04:00
71ab9dc02b Merge pull request #2049 from rbberger/singularity_container_update
Singularity container update
2020-05-04 17:27:54 -04:00
6d0ef85671 Merge pull request #2055 from akohlmey/reaxc-runtime-adjust
Make MIN_HBONDS define for reax/c configurable via an input option
2020-05-04 10:28:13 -04:00
48262fd0a9 Merge pull request #2051 from akohlmey/collected-small-changes
Collected small changes for the next patch release
2020-05-04 10:06:45 -04:00
bed6ad4660 manually incorporate fixes for ave/correlate/long from PR #2066 2020-05-04 08:18:56 -04:00
7295e93e9b step version strings for the next patch release 2020-05-03 07:28:38 -04:00
61284891ee add a few more packages to the "most" preset 2020-05-03 05:04:07 -04:00
b12b69f6dc silence compiler warning 2020-05-03 04:55:35 -04:00
f1e1644fe1 fix typo that resulted in LAPACK not being properly linked with USER-ATC 2020-05-03 04:55:25 -04:00
d811fd0da7 skip building chain.x, if no Fortran compiler is available 2020-05-03 04:23:52 -04:00
fdb4ba51da add patch to VORONOI package external build so it will compile with BSD make 2020-05-03 04:04:02 -04:00
f5be3ccab4 add the check for MPI in USER-ATC at the correct location 2020-05-03 03:06:41 -04:00
863b50501c port MPI stubs workaround to USER-ATC 2020-05-03 02:49:52 -04:00
4bf9c47317 support diskfree option to "fix halt" also on BSD variants 2020-05-03 02:34:40 -04:00
e8d4cc424e use different header for alloca(3) on *BSD 2020-05-03 01:10:04 -04:00
fa2a6d7c6b replace legacy preprocessor tests for linux with POSIX compliant ones 2020-05-03 01:04:52 -04:00
d5b9948129 extend FreeBSD preprocessor checks to other BSD flavors 2020-05-03 01:00:01 -04:00
795e2cb133 recover compilation of fix imd on FreeBSD 2020-05-02 16:04:01 -04:00
2b542eacb7 add FreeBSD compatibility 2020-05-02 15:56:24 -04:00
613b8a7596 use static_cast<>() for casting NULL 2020-05-02 06:29:43 -04:00
c18efdbfa7 initialize pointers in order of definition 2020-05-02 06:29:12 -04:00
1418ec4ace make MIN_HBONDS define for reax/c configurable via an input option 2020-05-01 23:22:48 -04:00
8c52032b7a Merge pull request #1902 from stanmoore1/kk_compute_coord_atom
Add Kokkos version of compute coord/atom
2020-05-01 19:36:19 -04:00
53ac67f522 Merge pull request #2053 from stanmoore1/kk_remap_mpi
Allow Kokkos remap to turn off CUDA-aware MPI
2020-05-01 19:35:03 -04:00
91d871ec27 Merge pull request #2054 from stanmoore1/kk_cb2a9e4
Add change missed in #2004
2020-05-01 19:33:51 -04:00
af3e8b4564 Add change missed in cb2a9e4 2020-05-01 13:25:23 -06:00
ab1ecdccfc fix typo in comment 2020-05-01 14:34:35 -04:00
3ccab20e9e add new false positives 2020-05-01 14:34:27 -04:00
5cb9d12538 whitespace cleanup 2020-05-01 14:34:20 -04:00