5647522906
various small cosmetic adjustments to increase conformance with LAMMPS programming conventions
2017-11-28 12:34:23 -05:00
5770a20e2c
added ExTeP to USER-MISC
2017-11-27 21:16:51 +01:00
281b1dc375
small updates to recently added docs and rename of an example dir
2017-10-18 14:56:47 -06:00
e93f8f8889
Merge pull request #671 from danicholson/user-uef
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USER-UEF package for extensional flow
2017-10-18 13:38:56 -06:00
957263431a
Ensure consistency with documentation
2017-10-04 09:38:43 +02:00
f07719e924
make fix rhok examples more consistent with LAMMPS conventions:
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- move example folder to examples/USER/misc/
- comment out writing of trajectory files
- reduce run length (for easier testing for regressions)
- record example outputs for 1 and 4 MPI processes
- rename readme.md to README.md for visibility
2017-10-03 10:08:38 -04:00
5f527091b8
Update readme.md
2017-10-03 12:02:01 +02:00
30aaa7e47b
Update readme.md
2017-10-03 12:00:43 +02:00
74dcf0bf9b
Update readme.md
2017-10-03 11:54:46 +02:00
e9b07a7a10
Update readme.md
2017-10-03 11:52:48 +02:00
fd8f5f8f9e
Update readme.md
2017-10-03 11:52:08 +02:00
5c59eb637b
Update readme.md
2017-10-03 11:49:57 +02:00
250ef9f837
Update readme.md
2017-10-03 11:46:08 +02:00
e44f370d49
Update readme.md
2017-10-03 11:44:52 +02:00
1e790fbafe
Update readme.md
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Now use the standard namings.
Corrected spelling errors.
2017-10-03 11:44:23 +02:00
35cc795972
Update in.setup
2017-10-03 11:17:43 +02:00
245bf74552
Rename setup.lmp to in.setup
2017-10-03 11:16:54 +02:00
7e8bbe8481
Rename pinning.lmp to in.pinning
2017-10-03 11:16:29 +02:00
e6d687faac
Rename crystal.lmp to in.crystal
2017-10-03 11:15:49 +02:00
1dffb0cf82
reran npt_biaxial examples
2017-10-02 23:27:10 -04:00
00aef0fe00
rerun logfiles for USER-UEF example inputs
2017-10-02 17:40:46 -04:00
4ef63feea7
reran examples
2017-09-29 15:50:31 -04:00
855b6000ef
initial commit. doc is in the works
2017-09-28 16:34:18 -04:00
f1aea57e30
Update readme.md
2017-09-25 18:48:21 +02:00
b35f2ff8b4
Example of Interface Pinning Computation
2017-09-25 18:44:24 +02:00
3381a43378
Added readme.m
2017-09-21 16:20:06 +02:00
73708b091c
Added readme file, and removed old files
2017-09-21 16:17:26 +02:00
5f1842829e
activate virial contribution in fix lb/rigid/pc/sphere by default and protect virial computation with evflag
2017-09-17 21:10:41 -04:00
4161868bcf
Merge pull request #640 from ohenrich/user-cgdna
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USER-CGDNA - sequence-dependent stacking and h-bonding strength
2017-09-06 08:52:05 -06:00
b170606052
Merge pull request #620 from amilumas/master
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Temper_NPT
2017-09-05 10:08:55 -06:00
12fe614ddf
Added sequence-dependent stacking and base-pairing strength
2017-09-05 10:48:38 +01:00
4d2ed30b35
add reference outputs to temper/npt example
2017-08-31 14:13:02 -04:00
f3dda30f8e
fully integrate temper/npt command into manual
2017-08-31 13:53:40 -04:00
a5b65c1af4
Mods for extra/special/per/atom and add toluene
2017-08-31 15:03:04 +02:00
6a4bbddb3b
Add files via upload
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data file for example
2017-08-28 14:56:37 -04:00
2add18e013
Create in.temper_npt
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example for temper/npt
2017-08-28 14:55:43 -04:00
f945d4567d
new USER-MESO package
2017-08-18 17:33:42 -06:00
7d0d701eaf
add reference outputs for QUIP/GAP example
2017-07-28 16:05:16 -04:00
85120842dd
update QUIP examples to closer match typical LAMMPS examples
2017-07-28 15:20:33 -04:00
1ddace4dba
Merge pull request #595 from libAtoms/idces2quip
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Add a (contrived) molecular example for USER-QUIP
2017-07-24 08:55:03 -06:00
1afab981b0
Clarified some points in in.molecular example
2017-07-22 14:40:33 +01:00
1af937e99d
Update in.molecular
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- expand comments to provide more details on the choice of exclusion settings
- comment out dump file generation
2017-07-21 22:00:29 -04:00
4e0a249e27
Add a (contrived) molecular example for USER-QUIP
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This example showcases the use of different 'special_bonds' settings for
different pair styles, so quip gets all the bonded neighbours but lj can
exclude them if it needs to.
The results have been checked against a pure quip implementation of the
potential; the expected lammps output is included.
DISCLAIMER: This example mixes parameters for methane and silane and is
NOT intended to be a realistic representation of either system.
2017-07-22 01:33:15 +01:00
1c92eecea7
move updated gauss_flow example to the correct folder
2017-07-14 14:01:41 -04:00
4d4c03a1e4
restore gaussian flow example that was lost. tweak input to make it usable for comparing
2017-07-14 12:33:40 -04:00
d3a45f6d50
Merge pull request #560 from aershadinia/master
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EES wall potential
2017-07-13 11:22:47 -06:00
7193fffe0d
make example input / output conform with LAMMPS conventions (no dump files, no log command) and update reference outputs
2017-07-06 16:08:25 -04:00
47649ff50f
some edits to make examples more illustrative.
2017-07-06 15:35:06 +09:00
d451dbb1a0
adjust EES wall input example to print out some thermodynamic info that can be used for testing
2017-07-05 13:54:56 -04:00
8e279d4ec8
Examples moved
2017-07-05 23:16:42 +09:00
