Commit Graph

34923 Commits

Author SHA1 Message Date
212b864052 Add all SNAP computations and 4D view Kokkos memory allocator 2023-04-08 11:19:07 -06:00
de4dbec661 Remove swo 2023-03-12 20:03:35 -06:00
584a6200f5 Mimic pair snap kokkos pattern 2023-03-12 20:02:57 -06:00
a0a7f14db5 Remove swo 2023-03-12 17:01:20 -06:00
234346c37d Experiment with different implementations 2023-03-12 17:00:48 -06:00
e1e7984822 Start ComputeSNAGridKokkos implementation 2023-03-10 16:19:24 -07:00
41c5ba98ab Merge pull request #3672 from lammps/update_codeowners
Update CODEOWNERS
2023-03-07 12:30:57 -05:00
6d7d0f78d5 Merge pull request #3674 from rbberger/gpu_rocm_bugfix
GPU package bugfix / cmake improvement
2023-03-07 07:39:48 -05:00
795227d376 Merge pull request #3677 from lammps/fix-balance-sort-option
Add sort option for load balancing commands
2023-03-06 17:03:08 -05:00
d13f8c6701 Merge pull request #3676 from gtow-MD/develop
Updated fix_deposit documentation
2023-03-06 15:47:12 -05:00
2af1949a92 whitespace 2023-03-06 13:42:45 -05:00
f63eec6953 gpu: drop hcc as platform and inherit compile defs
hip::host already adds the __HIP_PLATFORM_AMD__ definition

See https://github.com/ROCm-Developer-Tools/hipamd/blob/develop/hip-config.cmake.in#L180
2023-03-06 09:49:00 -07:00
376c7899ab add user option for performing message sorting during load balancing 2023-03-06 09:48:33 -07:00
31fc26a8ee Merge pull request #1 from gtow-MD/gtow-MD-patch-1
Updated fix_deposit documentation
2023-03-06 11:23:11 -05:00
4089b7bd37 Updated fix_deposit documentation 2023-03-06 11:11:49 -05:00
f658a947c6 gpu: fix broken HIP code path 2023-03-05 19:35:32 -07:00
b11049ba1a CMake: Use hip::host and hip::hipcub targets 2023-03-05 19:03:38 -07:00
142876a59b Merge pull request #3669 from Bibobu/tool_tabulate
Adding boltzmann inversion like pair tabulation to tools/tabulate
2023-03-03 22:39:38 -05:00
fc4ca0503e make --rdffile, --units, and --temperature required arguments 2023-03-03 20:51:28 -05:00
c3c6c5f154 python2 compatibility (or rather scipy of python2) and avoid NaNs 2023-03-03 20:50:56 -05:00
e373aa39e7 Update CODEOWNERS 2023-03-03 16:44:34 -07:00
e4b1a33ced Corrected error in temperature argument managment, added unit as a
command-line parameter
2023-03-03 15:32:46 +01:00
eb750f0217 Adde temperature for BI as a command-line argument 2023-03-03 15:22:49 +01:00
4612cd94f0 Removed bits of useless force computation. 2023-03-03 15:12:27 +01:00
67d4893f6e Added Warning section to pair_bi_tabulate.py file. 2023-03-03 15:10:36 +01:00
ed11cbd2c7 Updated tools/tabulate/README.md file to include pair_bi_tabulate.py 2023-03-03 15:04:46 +01:00
f23c2494ea Created tool file tools/tabulate/pair_bi_tabulate.py 2023-03-03 14:49:38 +01:00
0e03569def Merge branch 'develop' of github.com:/lammps/lammps into develop 2023-03-03 14:10:36 +01:00
df9bf18ed2 Merge pull request #3659 from stanmoore1/kk_deform_rigid
Allow `fix deform/kk` to use rigid bodies, fix logic issues with Kokkos neigh list
2023-03-02 19:04:13 -05:00
2979296c02 Merge pull request #3666 from ndtrung81/gpu-cuda-mps
Fixed GPU library builds with CUDA MPS
2023-03-01 21:02:27 -05:00
c8696478b7 Merge pull request #3648 from jrgissing/bond/react-updates+tests
Bond/react updates
2023-03-01 21:01:59 -05:00
c2fe2b4360 Merge pull request #3661 from bathmatt/hippy-fixes
Hippy fixes
2023-03-01 20:36:37 -05:00
d44ba14030 Merge pull request #3657 from akohlmey/custom-wall-fixes
Add fix wall/table and fix wall/lepton for customizable wall fixes
2023-03-01 20:16:56 -05:00
2ccfe635ce Removed the outdated CUDA_PROXY flag, using CUDA_MPS_SUPPORT consistently in CMake and traditional builds 2023-03-01 16:38:50 -06:00
ef6f4465af Need to keep check for newton on 2023-03-01 13:05:22 -07:00
512eead15a Fix logic issues in Kokkos neigh build 2023-03-01 12:08:33 -07:00
36ce91c634 Merge branch 'develop' of github.com:lammps/lammps into kk_deform_rigid 2023-02-28 08:53:52 -07:00
2511872823 Updated GPU.cmake and Makefile.cuda_mps to not error out with exclusive process mode with the CUDA MPS server in use 2023-02-28 00:41:47 -06:00
a67d82c183 Merge pull request #3662 from akohlmey/fix-alchemy
New fix command for alchemical transformations using multiple partitions
2023-02-27 21:07:21 -05:00
81a2d47c16 print warning about not checking lambda variable 2023-02-27 16:50:17 -05:00
446913f2f3 make ramp more flexible by defining lambda through a variable 2023-02-27 16:01:17 -05:00
83f936f31b Update fix_alchemy.rst 2023-02-27 11:00:11 -07:00
c9b22ba04f mention pair style hybrid/scaled as alternative 2023-02-25 17:17:41 -05:00
bb17541c30 add simple example for transforming a pure metal into an alloy 2023-02-25 16:01:26 -05:00
2bad63c68e add documentation 2023-02-25 14:09:14 -05:00
60129958c8 refactor how properties computed by the fix are accessed
lambda is no an (intensive) scalar property
and the vector property only has the potential energies.
pressure is accessed via compute pressure/alchemy.
2023-02-25 12:47:49 -05:00
d691d1db78 synchronize box dimensions at the beginning and when needed 2023-02-25 12:42:10 -05:00
c288a20077 add progress information to screen or universe logfile 2023-02-25 11:14:56 -05:00
7242186045 add compute pressure/alchemy so it can be used with fix npt 2023-02-25 10:43:49 -05:00
fdf5148238 don't store topology information with ghost atoms. they will be ignored. 2023-02-24 22:55:23 -05:00