Commit Graph

35176 Commits

Author SHA1 Message Date
21c71bf35d mention project boards. remove reference to milestones. 2023-03-16 23:36:13 -04:00
4a7ab34568 lift restriction to Sphinx version < 6.0, enable jquery extension 2023-03-16 23:07:18 -04:00
a232915e71 update example logs for changed granular pair style 2023-03-16 22:37:58 -04:00
073f21c0d9 spelling 2023-03-16 22:35:25 -04:00
c9b383d3f0 grammar 2023-03-16 22:18:35 -04:00
e7b7d5804e Update URL for EPEL 2023-03-16 21:23:02 -04:00
08153b7b4d trim list of known plumed source packages. 2023-03-16 21:01:32 -04:00
4e221803b0 Merge branch 'develop' into collected-small-changes 2023-03-16 20:53:04 -04:00
7c0fdbe2d9 Merge pull request #3512 from jtclemm/gran-temp
Refactoring the GRANULAR package
2023-03-16 20:47:40 -04:00
ea20c934ea print warning when using fix efield with a TIP4P pair style 2023-03-16 18:33:23 -04:00
bf94448843 simplify and avoid segfault without pair style 2023-03-16 18:32:54 -04:00
5e6004961d Merge branch 'develop' into collected-small-changes 2023-03-16 18:00:36 -04:00
224b1369a1 Merge pull request #3685 from akohlmey/more-tip4p-support
Add TIP4P versions for compute dipole, compute dipole/chunk and fix efield
2023-03-16 17:59:58 -04:00
f1539d0ef5 silence compiler warnings 2023-03-16 17:53:58 -04:00
b41d826e0a Merge branch 'develop' into gran-temp 2023-03-16 17:44:36 -04:00
d3a23817f1 disable purging old wheel files 2023-03-16 17:25:11 -04:00
4a66389bf1 purge build folder from within install.py script 2023-03-16 16:39:34 -04:00
feb1b9e029 fix whitespace 2023-03-16 12:55:30 -04:00
180ed2553c Merge branch 'develop' into collected-small-changes 2023-03-16 12:54:48 -04:00
6069e8cb14 Merge pull request #3684 from jrgissing/encode_improper_symmetries
Encode improper symmetries
2023-03-16 12:33:15 -04:00
d71a78449a fix two bugs in the ndx2group command 2023-03-16 12:29:51 -04:00
45a3e30f6c Merge pull request #3689 from rbberger/cmake_optional_python_install
cmake: remove pip install from install target
2023-03-16 10:46:15 -04:00
f63befc80f consolidate replicated commands to single location 2023-03-16 10:29:00 -04:00
5c5e7b7e48 update fix mscg example 2023-03-16 08:39:23 -04:00
0e3dc6fefa Download the latest MSCG snapshot to address bug in library. 2023-03-16 08:01:26 -04:00
a8c27a2275 clarify symmatoms convention 2023-03-15 23:55:13 -04:00
4940bda15f remove references to "make install" for Python package installation 2023-03-15 23:08:46 -04:00
0bf0fd98cc explicitly specify central atom 2023-03-15 21:29:14 -04:00
56f4aaff47 explicitly specify central atom 2023-03-15 21:28:05 -04:00
fa9062a87e make Force::special_lj and Force::special_coul accessible through the library interface 2023-03-15 18:39:32 -04:00
32c695a7d4 tag all TIP4P related pair style tests as unstable 2023-03-15 12:17:57 -04:00
730e5d2e64 Merge pull request #3671 from akohlmey/bond-harmonic-restrain
Add new bond style harmonic/restrain
2023-03-14 16:40:28 -04:00
88c8781396 silence compiler warnings 2023-03-14 10:17:20 -04:00
14180774b7 mention OpenMP support in the GPU library 2023-03-14 07:00:34 -04:00
d2faf86214 Merge branch 'develop' into bond-harmonic-restrain 2023-03-14 00:41:28 -04:00
03454aeefb compile GPU library with thread support when BUILD_OMP is enabled 2023-03-13 23:07:11 -04:00
0e2b2eb266 Merge branch 'develop' into collected-small-changes 2023-03-13 22:47:08 -04:00
17f39d9d2c rename fix STORE/PERATOM to STORE/ATOM 2023-03-13 22:33:47 -04:00
e4ad330c2b Merge pull request #3675 from wmbrownIntel/mar2023_gpu_misc
Misc Improvements to GPU Package
2023-03-13 21:43:08 -04:00
1031110d93 update docs 2023-03-13 19:55:52 -04:00
ef67f790a2 whitespace 2023-03-13 19:43:44 -04:00
3ba37fc954 Merge branch 'develop' into bond-harmonic-restrain 2023-03-13 19:43:16 -04:00
c369c0252f fix issues with changes in fix STORE/PERATOM 2023-03-13 19:43:08 -04:00
92302d0f22 Merge branch 'develop' into mar2023_gpu_misc 2023-03-13 19:02:20 -04:00
3815c0ef76 modify fix STORE/PERATOM and callers to allow ghost comm 2023-03-13 17:00:54 -06:00
2d8936068e Merge pull request #3679 from ndtrung81/dielectric-bugfixes
Dielectric package doc update and bugfix
2023-03-13 18:27:50 -04:00
6bec23e7db Merge pull request #3668 from evoyiatzis/master
Implementation of analytical expressions for Born matrix
2023-03-13 17:19:05 -04:00
21293f1c08 update links and hashes for new plumed2 releases 2023-03-13 12:10:41 -04:00
a8c1359c54 make energy handling consistent for variable field 2023-03-11 18:56:29 -05:00
251fac2c60 add unit tests for fix efield/tip4p 2023-03-11 18:43:46 -05:00