Commit Graph

24067 Commits

Author SHA1 Message Date
2ce10cc435 Add unit test for get_thermo 2020-11-23 13:35:17 -05:00
3ddc1e680c Add unit test for extract_variable (atomstyle) 2020-11-23 13:14:15 -05:00
5ff0c3d4f0 Add unit test for extract_variable (equalstyle) 2020-11-23 13:07:00 -05:00
875057538f Fix docstring of extract_variable 2020-11-23 12:45:37 -05:00
49a1683dda Merge branch 'master' into python_interface_coverage 2020-11-23 11:47:23 -05:00
1a2911c883 Merge pull request #2420 from rbberger/mpi_tests
Add MPI-enabled unit tests (C/C++ only)
2020-11-23 10:35:55 -05:00
b8d821e1f9 Merge pull request #2481 from lammps/energy_virial_constants
Introduce enums for energy and virial flags
2020-11-23 10:35:20 -05:00
e1835250c7 missing brace 2020-11-20 13:51:08 -07:00
cbde5619b0 leave placeholder for KSpace in compute centroid/stress/atom 2020-11-20 10:51:33 -07:00
2d69051cdf add documentation for sublo/subhi extracted flags. add corresponding entries to get data type. 2020-11-19 19:24:36 -05:00
371b1a80e3 add support for '-in none' for multi-partition runs from the library interface 2020-11-19 18:58:21 -05:00
7450d9547a add tests for accessing world/universe size and rank with different MPI settings 2020-11-19 13:52:26 -05:00
6acc69ddd2 reformat with clang-format 2020-11-19 13:51:32 -05:00
c7247aaaaf provide access to universe and world size and rank information. and number of OpenMP threads 2020-11-19 13:49:10 -05:00
949274a2a4 refactor handling of partition arguments so it does not modify the string passed 2020-11-19 13:48:28 -05:00
3d7fd453c3 allow extracting variables that are not atom or equal style compatible 2020-11-19 13:47:23 -05:00
9ea025295d need to define LAMMPS_LIB_MPI to make lammps_open() visible 2020-11-19 11:33:15 -05:00
96dece97ef Merge branch 'master' into mpi_tests 2020-11-19 11:22:58 -05:00
d1af1aa12d Merge pull request #2424 from jtclemm/restart_neigh_hist
Patching neighbor history restarts
2020-11-19 11:13:50 -05:00
96db39f08b Merge pull request #2450 from jrgissing/molecule-custom_id_order
molecule: use user-provided IDs in molecule files
2020-11-18 17:52:16 -05:00
6d0c8e71de Correct assignment of centroidstressflag 2020-11-18 17:51:04 -05:00
5691ec3dfd insure cvflag is zero, other tweaks 2020-11-18 15:05:11 -07:00
61ccccf908 Merge pull request #2462 from akohlmey/replicate-template-fixes
Preserve molecule templates when using "replicate"
2020-11-18 16:48:06 -05:00
c62c907281 doc string tweak 2020-11-18 13:02:07 -07:00
006fae0ee1 one more optimization 2020-11-18 12:52:59 -07:00
3ee6203e5a simplification to Pair::ev_setup() 2020-11-18 12:51:24 -07:00
8ca690acd3 missed one file 2020-11-18 12:22:06 -07:00
0876684780 energy/virial flags with CENTROID enum 2020-11-18 12:17:14 -07:00
7507773ead Merge pull request #2441 from stanmoore1/kk_fix_shake
Add Kokkos support for fix shake and forward comm on Device for fixes
2020-11-18 11:17:57 -05:00
1002383a45 Merge branch 'master' into replicate-template-fixes 2020-11-18 10:37:57 -05:00
64910d636c Merge pull request #2464 from iafoss/patch-1
bug fix in pair_mesont_tpm.cpp
2020-11-16 16:48:18 -05:00
35035189e6 Replace a few more 2s with VIRIAL_FDOTR 2020-11-16 16:36:06 -05:00
f6a1352be3 Update remaining lines 2020-11-16 16:23:30 -05:00
251dcdf8a2 Make use of ENERGY_ and VIRIAL_ constants 2020-11-16 15:33:15 -05:00
145d688fa4 clairfy docs 2020-11-16 15:09:17 -05:00
746655ed2e Undo more changes to make values match new constants 2020-11-16 11:52:42 -05:00
5ce536f2e9 Update constant names 2020-11-16 11:03:18 -05:00
1ba9dd7435 Apply CENTROID_* constants 2020-11-16 11:01:31 -05:00
c0f3697d9e Undo value changes for CENTROID constants 2020-11-16 10:51:56 -05:00
f3bc76d6a4 Add CENTROID enum and rename some constants 2020-11-16 10:35:42 -05:00
dd23db9369 standardize flags for energy/virial computations in forces 2020-11-16 08:13:33 -07:00
d287e11610 clarify docs 2020-11-14 16:04:39 -05:00
8b9f2e0539 molecule: add atom ID completeness check 2020-11-14 15:51:26 -05:00
8e3a556461 Merge pull request #109 from lammps/master
rebase
2020-11-14 13:52:16 -05:00
aaae3da12a Update comment 2020-11-13 17:52:37 -05:00
4b136d9eeb Merge pull request #2482 from stanmoore1/kk_fft_bugfix
Fix memory bug in Kokkos KISS FFT
2020-11-13 17:45:59 -05:00
4a8c458634 Update comment 2020-11-13 17:21:41 -05:00
7500d902da Shorten constant names and move to force.h 2020-11-13 17:15:40 -05:00
bfd71f330b Simplify other AtomStyles tests 2020-11-13 17:03:52 -05:00
5d79ba12d7 Use macro for better message during failure 2020-11-13 15:14:40 -05:00