Commit Graph

26780 Commits

Author SHA1 Message Date
2dfbdcbc40 Added pppm/disp/dielectric, minor updates to lj/long/coul/long/dielectric 2021-06-13 23:55:28 -05:00
1e5e08fc1b Merge pull request #2793 from ndtrung81/user-dielectric
Contributing a new package USER-DIELECTRIC
2021-06-08 20:07:36 -04:00
41bdf0f398 address spelling issues and update list of false positives 2021-06-08 18:46:48 -04:00
832ae2c049 Merge branch 'master' into user-dielectric 2021-06-08 17:11:37 -04:00
9944bbe61e Merge pull request #2786 from akohlmey/collected-small-changes
Collected small changes
2021-06-08 14:08:28 -04:00
b8236c6402 improve error messages by printing unrecognized property 2021-06-08 11:19:21 -04:00
a32e682697 error exit if driver sends number of atoms. add comment why. 2021-06-08 10:38:28 -04:00
337527282d Added the documentation for atom style dielectric and for compute efield/atom 2021-06-07 16:36:45 -05:00
ffd1b2bfa9 fix compilation issue 2021-06-07 11:48:13 -04:00
7322066dde use alternate approach for dealing with Package style dependency issues 2021-06-06 18:39:19 -04:00
8b0a063059 must not test for bonded interactions without MOLECULE package 2021-06-06 18:37:14 -04:00
0ee6cf798c include cythonize for building MLIAP with Python support 2021-06-06 18:25:47 -04:00
b524a0b819 correctly remove dependent sources for fix QEQ 2021-06-06 18:25:16 -04:00
0bc86a7eea modernize and reformat code 2021-06-05 21:43:38 -04:00
f7ca10b070 update documentation towards more complete integration
this includes the following steps:
- added missing sections about the packages (incomplete)
- added missing files for the pair styles and the compute (incomplete)
- merge fix doc files into a single file (incomplete)
- link to added styles from Commands overvies and style lists (incomplete)

major part that is missing is the documentation of the atom style and
the description of the file format in the read_data docs.
there should probably also additions to the `set` command to set those
properties from input scripts.
2021-06-05 21:00:35 -04:00
5e675e6eff bugfix for library unit test due to CMake package changes 2021-06-05 19:19:14 -04:00
c5412db1a4 correct package dependency handling 2021-06-05 17:26:24 -04:00
c5c9a27593 protect OpenMP pragma with preprocessor define 2021-06-05 16:24:39 -04:00
3a73dd831a fix bug when reporting fix wall energies 2021-06-05 16:16:57 -04:00
655c7b02ec update conventional build installation 2021-06-05 16:03:31 -04:00
22c391e603 add new package to presets 2021-06-05 15:57:47 -04:00
1fb4ec663b port code to current LAMMPS style and make it compatible with OpenMP 4.x compilers 2021-06-05 15:55:23 -04:00
75e5ad4c7a correct CMake support (also fix some bugs for other packages) 2021-06-05 15:48:25 -04:00
ac403394e4 disable clang-format processing for .cpp files by default 2021-06-05 12:14:46 -04:00
02707d7a0d add CMake support 2021-06-05 12:11:36 -04:00
6b6cae7c11 update dependencies 2021-06-05 11:28:11 -04:00
f7bae950e8 update .gitignore 2021-06-05 11:24:03 -04:00
672fa7d8ff move /omp styles to USER-OMP package 2021-06-05 11:21:26 -04:00
7928e90179 make headers compatibel with clang-format 2021-06-05 11:20:47 -04:00
076e25f2a5 update LAMMPS homepage URLs 2021-06-05 11:16:27 -04:00
13b8c63e7a Merge branch 'master' into user-dielectric 2021-06-05 11:14:44 -04:00
f92bee868a whitespace fixes 2021-06-05 11:12:58 -04:00
2dd7a0a678 Removed debugging leftover 2021-06-04 23:09:27 -05:00
ed604e906b Updated README for USER-DIELECTRIC 2021-06-04 22:41:25 -05:00
56b9de1d6b Merge remote-tracking branch 'github/master' into collected-small-changes 2021-06-04 11:38:31 -04:00
d74d7cfd5f Merge pull request #2789 from rbberger/gpu_hip_fixes
More GPU fixes for HIP
2021-06-04 01:08:53 -04:00
80c90d8ee2 fix broken links/references 2021-06-04 00:34:37 -04:00
067fd48b57 Merge remote-tracking branch 'github/master' into collected-small-changes
# Conflicts:
#	python/lammps/__init__.py
#	python/lammps/core.py
2021-06-04 00:28:32 -04:00
2463c2dd71 Merge pull request #2787 from rbberger/python_updates
Update to Python package and examples
2021-06-04 00:26:48 -04:00
41787088a3 Merge pull request #2790 from rbberger/docs_canonical_url
Allow setting canonical URL in doc build
2021-06-03 23:16:48 -04:00
5599deae0a quick-fix to compile plumed-2.7.1 with newer GCC and Clang compilers 2021-06-03 19:47:32 -04:00
ed624b518e update windows specific instructions for running LAMMPS for latest package 2021-06-03 16:51:39 -04:00
b92c2ab873 correct broadcast for atom->natoms 2021-06-03 16:14:14 -04:00
2afa783e1e silence compiler warning 2021-06-03 16:13:38 -04:00
6fb6980987 Set copyright date automatically 2021-06-03 14:18:20 -04:00
4a8b460201 update singularity container definition file for Fedora 34 2021-06-03 14:04:59 -04:00
2b012f4af7 Update copyright date in docs 2021-06-03 13:16:04 -04:00
415f33134b fix typos in Kolmolgorov-Crespi potential formula 2021-06-03 13:12:43 -04:00
21607fe0ce Update website URL in lammps theme 2021-06-03 12:03:36 -04:00
1e66dfbd74 Add LAMMPS_WEBSITE_BASEURL env variable to set canonical URL in docs 2021-06-02 17:44:45 -04:00