Commit Graph

39806 Commits

Author SHA1 Message Date
3ea74b1725 update atom_style template test for added charge 2024-08-21 16:20:17 -04:00
c968787c41 fix molecule add for MESH and remove 'not compatible' error message 2024-08-21 16:19:09 -04:00
3aadd8bd84 fix typo in comment 2024-08-20 19:12:27 -04:00
cac0c56687 add charge to atom style template 2024-08-20 19:12:09 -04:00
d75fe348f1 bugfix for compute_scalar() to work, test PASSED 2024-08-20 05:40:02 -04:00
5f5e2d9a64 added fix nve/limit/kk 2024-08-19 20:58:41 -04:00
90aaaea75a cleanup 2024-08-09 03:05:23 -04:00
ce4e01fb78 author information only in cpp, kokkos version needs protected instead of private variables 2024-08-07 00:12:11 -04:00
1166531594 add 4 units tests for fix wall/region/kk 2024-08-06 01:24:21 -04:00
f6ea649585 add fix wall/region/kk 2024-08-05 06:30:01 -04:00
d1804fc776 Merge branch 'alphataubio-kokkos-bio' of https://github.com/alphataubio/lammps-alphataubio into alphataubio-kokkos-bio 2024-08-04 17:38:21 -04:00
d0b023e6b5 Merge branch 'lammps:develop' into alphataubio-kokkos-bio 2024-08-01 16:18:15 -04:00
4bec1788a6 make operator and inline functions const, plus remove printf debugging 2024-08-01 01:31:11 -04:00
fbf1451a2f add more crossterms to cmap unit test 2024-08-01 01:28:57 -04:00
18b3f6b4d4 Merge pull request #4250 from akohlmey/collected-small-fixes
Collected small changes and fixes
2024-07-31 18:21:23 -04:00
ff2639a196 Merge pull request #4252 from k-harris27/fix-empty-label
Fix reading empty type label string in restart
2024-07-31 17:37:32 -04:00
3da8e9a9a5 add cmap unit test 2024-07-31 12:59:24 -04:00
4f89b0b783 first draft fix cmap/kk 2024-07-31 12:58:14 -04:00
8bc38709a4 raise minimum required version of clang-format and extend search to newer versions 2024-07-31 09:10:43 -04:00
9c9fac49d7 Fix reading empty type label string in restart 2024-07-31 13:39:41 +01:00
5dff36aa43 apply clang-format 2024-07-31 06:49:55 -04:00
c540252d8b sphinx 7.4.x is the last series of versions compatible with current breathe 2024-07-30 22:31:20 -04:00
7e3d613c80 set to zero on underflow to avoid std::stod() throwing an out-of-range exception 2024-07-30 22:24:59 -04:00
cc1e0ac9c5 replace atoi() with std::stoi() 2024-07-30 21:50:44 -04:00
d68bc9f628 replace remaining calls to atof() with std::stod() 2024-07-30 21:02:55 -04:00
a54e67bf1c Merge pull request #4242 from akohlmey/collected-small-fixes
Collected small fixes and updates for LAMMPS and LAMMPS-GUI
2024-07-30 20:04:19 -04:00
3c6adde66b replace atoi()/atof() with std::stoX() 2024-07-30 16:25:39 -04:00
7b2c7e0df8 new code owner 2024-07-30 16:17:24 -04:00
5016a0848f make compatible with per-type and per-atom masses 2024-07-30 16:16:05 -04:00
1254d579f7 reduce compiler warnings, remove dead code, follow LAMMPS conventions more closely 2024-07-30 16:13:06 -04:00
701280a648 lower GSL version requirement for compatibility with more (Linux) systems 2024-07-30 15:20:48 -04:00
b6834f33c0 modernize, more selective argument checking, better error messages 2024-07-30 14:21:56 -04:00
75b09ed143 discuss in more detail MPI support in PyLammps. Some small improvements in MPI support
MPI related changes are:
 - Raise exception in PyLammps.eval() if called from MPI rank
 - Print (some) informational and warning messages only from MPI rank 0
2024-07-30 11:27:31 -04:00
a5a0620dca When KOKKOS has been compiled with GPU support the GPU *must* be used 2024-07-30 10:35:15 -04:00
bd2e071ef0 clarify that hybrid styles also do not write coeff data to data files 2024-07-30 08:59:51 -04:00
208216ba3d Merge branch 'kokkos-amd-gfx1103-support' into collected-small-fixes 2024-07-30 08:46:22 -04:00
cb6e71b72f fix typo 2024-07-30 08:46:01 -04:00
1c40cd1c22 avoid segfault 2024-07-30 08:45:01 -04:00
0ea45d89d9 clarify that all hybrid styles do not write Coeff sections 2024-07-30 05:45:24 -04:00
4a972c4311 fix recenter/kk works with coords, init, null plus 3 tests 2024-07-30 04:28:40 -04:00
620af2599b use std::stoX() functions 2024-07-30 03:57:23 -04:00
92cbbaab6a no longer used 2024-07-30 03:54:47 -04:00
a75862088a replace atof() with std::stod() 2024-07-30 03:43:26 -04:00
f0e9d0c96d update comment 2024-07-30 03:39:03 -04:00
5082d15844 use std::stoXX() functions and check for incomplete conversions and exceptions 2024-07-30 03:38:53 -04:00
53ae731e09 first draft fix recenter/kk and unit test 2024-07-30 03:30:38 -04:00
bbe1ba4499 Merge branch 'lammps:develop' into alphataubio-kokkos-bio 2024-07-30 02:09:44 -04:00
d2b12372f1 not used anymore 2024-07-30 01:31:56 -04:00
9aadb16c06 not used anymore 2024-07-30 01:31:38 -04:00
1035dcf735 get rid of ATOBIGINT 2024-07-30 01:18:22 -04:00