Commit Graph

9419 Commits

Author SHA1 Message Date
45fa3a0ebd add write_data support for class2 dihedrals 2013-07-12 12:06:12 +02:00
185666821f include ethane test for class 1 force field 2013-07-12 11:35:00 +02:00
0cbd052c81 support more types of comparison. 2013-07-12 11:34:40 +02:00
a520446090 update reference data for shifted boxes 2013-07-12 09:29:45 +02:00
454636a783 add support for dihedrals and impropers and more class2 coeff sections 2013-07-12 09:28:57 +02:00
444749a7c3 include support for MKL 2013-07-12 09:28:18 +02:00
245f3d4a1e update readme 2013-07-12 08:32:32 +02:00
4f7adaca2c add flag to make recentering optional 2013-07-12 07:33:22 +02:00
0db8b7e216 clean up box handling by using a separate storage for LAMMPS data
shift box to be around the geometric center of the coordinates
2013-07-12 01:07:38 +02:00
af632edbf7 rename class2 reference files, too 2013-07-12 00:06:15 +02:00
cf32334157 fix typos 2013-07-11 23:57:49 +02:00
503bf92a95 split class two tests into two variants 2a and 2b with pcff and compass 2013-07-11 23:56:21 +02:00
1adad55790 fix longstanding improper/OOP bug in msi2lmp 2013-07-11 23:53:23 +02:00
8757924908 update reference data files with corrected versions 2013-07-11 21:41:24 +02:00
16fb07bee8 enable recently added write data support 2013-07-11 21:40:00 +02:00
7d9e834df1 update reference data files to corrected versions 2013-07-11 21:34:07 +02:00
90e7be08f4 add more support for write_data to lj pair styles 2013-07-11 21:30:54 +02:00
894cd7edb0 count tests and errors and report both 2013-07-11 21:05:42 +02:00
4de9ded009 next test example: one hydrogen and one water 2013-07-11 20:59:48 +02:00
7d6b934ac8 add write_data support 2013-07-11 20:58:49 +02:00
a47b170267 add second test example: water 2013-07-11 20:33:50 +02:00
583b59c0a1 add support for angles 2013-07-11 20:33:01 +02:00
c2bcf79762 fix typo 2013-07-11 20:26:54 +02:00
e99ae55b69 add new regression test suite for msi2lmp and one pair of tests 2013-07-11 19:47:50 +02:00
4d937a0e31 remove support for older versions of LAMMPS 2013-07-10 14:31:57 +02:00
2375bf2da5 we cannot have hyphens in varible names. ugh. 2013-07-09 16:15:10 +02:00
90560d2234 another try to fix this annoying pruning thing. 2013-07-09 16:00:59 +02:00
62d8484b85 differentiate between subpackages when pruning 2013-07-09 15:53:08 +02:00
8a2c6dbcd5 exclude "latest" entries from repomd 2013-07-09 14:50:19 +02:00
7eb24e316d include date selection logic from rpm sync script 2013-07-09 14:32:53 +02:00
010ea8f925 fix typo in sync script 2013-07-09 14:31:49 +02:00
d7fedb825e fix build issue with msi2lmp potentials 2013-07-09 13:47:29 +02:00
5984a30089 improve file delete logic 2013-07-09 13:41:58 +02:00
7c9745d49d Merge remote branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
	src/MANYBODY/pair_airebo.cpp
	src/MANYBODY/pair_comb.cpp
	src/MANYBODY/pair_lcbop.cpp
	src/USER-OMP/neighbor_omp.h
	src/fix_shear_history.cpp
	src/my_page.h
	src/neigh_list.cpp
2013-07-09 12:53:19 +02:00
b249ce65f6 add thread timers to MSM /omp styles 2013-07-09 09:20:39 +02:00
89efd487b1 Merge branch 'mypage' into lammps-icms
Resolved Conflicts:
	src/USER-OMP/neighbor_omp.h
2013-07-09 08:42:50 +02:00
1d41a10728 remove the old-fashioned fallback mode. tweak timing output format. 2013-07-08 23:51:29 +02:00
f1e9f799b0 add timer support for kspace styles 2013-07-08 23:11:31 +02:00
e59d4f6730 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10232 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-07-08 20:12:31 +00:00
156e5941b4 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10231 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-07-08 20:12:30 +00:00
60d49a7aad git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10230 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-07-08 20:10:50 +00:00
0b8e46c7e3 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10229 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-07-08 19:36:22 +00:00
3f77fae0b2 add per thread timing for bonded interactions 2013-07-08 20:49:54 +02:00
f6ac56bfa0 add per thread timer calls to pair styles 2013-07-08 20:34:26 +02:00
f188305cd9 include neighbor list per thread timing 2013-07-08 20:06:48 +02:00
616bfc3894 make per thread summare ordered similar to MPI output 2013-07-08 20:06:34 +02:00
632b105572 stop using clock_gettime() since it seems to be horribly inconsistent 2013-07-08 20:06:09 +02:00
40319752ad git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10227 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-07-08 15:34:11 +00:00
b9366159e0 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10226 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-07-08 15:33:30 +00:00
b13ebf5889 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10224 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-07-08 14:45:35 +00:00