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0bcb1bd301
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more spelling fixes and occational re-edits
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2018-11-20 00:06:40 -05:00 |
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c6c00ee7ee
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more spelling fixes
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2018-11-19 20:46:32 -05:00 |
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13ae678f39
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more manual spelling fixes
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2018-11-19 16:13:57 -05:00 |
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8a94a32551
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avoid duplicate label
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2018-11-19 15:19:23 -05:00 |
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b6f0fe4c2d
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more changes for correct and consistent spelling in the manual
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2018-11-19 11:47:33 -05:00 |
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809bd855b6
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adjust wording of non-features discussion to be more in-sync with recent developments
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2018-11-19 11:24:55 -05:00 |
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4dc2f9c6c4
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fix some spelling errors in the manual
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2018-11-19 11:24:17 -05:00 |
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bbcb659158
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render fix commands in 6 columns instead of 8 so only narrow screens need to scroll horizontally
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2018-11-16 22:09:07 -05:00 |
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dc6054fc2d
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rename "All commands" headers to "General commands"
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2018-11-16 22:04:35 -05:00 |
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0264edfcec
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provide example for how to set Tdamp correctly to 100 timesteps for all choices of unit
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2018-11-16 16:27:47 -05:00 |
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a66384cfea
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update github tutorial/howto for recent changes in the development workflow
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2018-11-16 16:27:05 -05:00 |
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cf79751f4f
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Merge pull request #1207 from akohlmey/next-patch-release
Patch release 15 November 2018
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2018-11-15 19:33:52 -05:00 |
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090778c42b
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Merge pull request #1204 from lammps/doc-plumed
Linkage mode improvements and documentation updates for USER-PLUMED package
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2018-11-15 13:48:58 -05:00 |
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4d9e2a014b
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add detailed build instructions and discussion of linkage modes for PLUMED library and USER-PLUMED package
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2018-11-15 11:35:04 -05:00 |
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8a4983e4bc
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reformatting and simplification of fix plumed docs
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2018-11-15 10:53:38 -05:00 |
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82d6aa9add
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interlink fixes colvars, plumed, and smd
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2018-11-15 10:52:41 -05:00 |
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4231ab3d57
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correct some links
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2018-11-15 10:52:03 -05:00 |
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25914ea3f3
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patch 15Nov2018
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2018-11-15 10:17:25 -05:00 |
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2c644c5f2e
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Merge pull request #1197 from akohlmey/collected-small-fixes
Collection of small changes and bugfixes for the next release
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2018-11-13 15:18:09 -05:00 |
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4805e1df22
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doc page additions for USER-PLUMED package
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2018-11-13 08:29:07 -07:00 |
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a026ce9669
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correct broken links detected by make mobi
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2018-11-12 21:38:26 -05:00 |
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7e779d16de
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correct broken links in manual reported by 'make html'
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2018-11-12 21:33:37 -05:00 |
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0ca02b6f41
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added new commands to doc pages, fixed a few missing entries as well
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2018-11-12 17:23:15 -07:00 |
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90caf0019c
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fix doc page errors
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2018-11-12 12:32:53 -07:00 |
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3b7ebbb8df
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new hyper examples
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2018-11-12 12:32:53 -07:00 |
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0c8ce199af
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more updates to hyper docs
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2018-11-12 12:32:52 -07:00 |
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4a6f088c0b
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updates to hyper doc pages
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2018-11-12 12:32:52 -07:00 |
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56598fcd0b
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changes to prd command doc page
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2018-11-12 12:32:52 -07:00 |
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265c11dca9
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more edits to hyper docs
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2018-11-12 12:32:52 -07:00 |
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d6631266ce
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doc files in wrong dir
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2018-11-12 12:32:52 -07:00 |
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f68d77c7af
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correct formatting
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2018-11-09 08:03:58 -05:00 |
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7a4f534676
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replace non-ASCII character
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2018-11-09 08:03:41 -05:00 |
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729201ab93
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fix typo reported in #1199
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2018-11-09 08:03:19 -05:00 |
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1651a21f92
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Merge pull request #1198 from akohlmey/next-patch-release
Patch release 9 November 2018
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2018-11-08 20:49:49 -05:00 |
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f2a29880e2
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patch 9Nov2018
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2018-11-08 16:48:43 -05:00 |
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e0955f6434
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Merge branch 'master' into sdpd to resolve merge conflicts
# Conflicts:
# cmake/CMakeLists.txt
# src/Makefile
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2018-11-08 16:32:02 -05:00 |
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3681bc853d
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Merge pull request #1195 from jrgissing/bond/react-custom_edges
Bond/react: charge update for custom edges
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2018-11-08 16:19:23 -05:00 |
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a6e9b99295
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Merge pull request #1180 from gtribello/master
Add natively supported PLUMED interface to LAMMPS
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2018-11-08 16:16:50 -05:00 |
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a1e8992eac
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replace non-ASCII characters
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2018-11-06 22:21:19 -05:00 |
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84fcf01bed
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bond/react: allow custom update of charges near template edges
also, fixes a bug introduced in PR #1189, when not using stabilization
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2018-11-06 19:59:22 -07:00 |
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4e6253254c
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Merge branch 'master' into user-cgdna
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2018-11-06 19:48:06 +00:00 |
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562296bdb7
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Updated link to preprint article
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2018-11-06 19:44:35 +00:00 |
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91c4ef6f64
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Merge pull request #1189 from jrgissing/bond/react-custom_group
Bond/react custom group support
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2018-11-06 10:32:06 -05:00 |
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ab7aa9dfda
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correction to fix group property doc
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2018-11-05 00:49:33 -07:00 |
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f7aa01d74a
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bond/react: convert group-ID to group-ID-prefix
enables consistent syntax when using custom groups
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2018-11-03 11:57:46 -06:00 |
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b7e507a258
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fix typo and reformat
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2018-11-02 21:08:45 -04:00 |
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ea9746f26d
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insert fix plumed docs into manual generation
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2018-11-02 21:08:32 -04:00 |
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85a5cab663
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Update Colvars library to version 2018-10-16
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2018-11-02 17:45:20 -04:00 |
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b1c50e3bbe
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Added plumed documentation in a txt file
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2018-11-02 19:50:49 +00:00 |
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b67e54dd7d
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reciprocal 'related commands'
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2018-11-01 01:09:52 -06:00 |
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