Commit Graph

22590 Commits

Author SHA1 Message Date
4d90c2b74b Update Kokkos library in LAMMPS to v3.2 2020-08-25 20:21:48 -06:00
450fd12d31 Changes needed for Kokkos v3.2 2020-08-21 14:45:12 -05:00
e9de1c1a9a Merge pull request #2293 from akohlmey/collected-small-changes
Collected small changes and fixes
2020-08-19 11:11:43 -04:00
1413e61553 tweak test presision so it passes with more compilers 2020-08-19 00:59:50 -04:00
7e4e756b23 remove dead code 2020-08-18 22:46:34 -04:00
174a282e0c fix signed vs. unsiged warning 2020-08-18 22:46:26 -04:00
8e74d5ad02 Eigen3 is now hosted at GitLab. The bitbucket repo is gone. Update URLs and MD5s 2020-08-18 21:29:43 -04:00
43f6fa4b29 Merge pull request #2136 from rbberger/refactor-reading
Refactor value parsing code segments and add dump tests
2020-08-18 16:18:33 -04:00
a53ee5664e silence compiler warnings about signed vs. unsigned ints 2020-08-18 15:51:06 -04:00
e185537255 avoid uninitialized access 2020-08-18 14:33:14 -04:00
78d5714247 silence signed vs. unsigned integer warnings 2020-08-18 14:33:02 -04:00
a537ffabf9 correct illegal and uninitialized data access issue 2020-08-18 14:19:57 -04:00
2fea8f888a Merge branch 'master' into collected-small-changes 2020-08-18 14:15:06 -04:00
d63f3d87eb Merge pull request #2292 from akohlmey/warning-no-mixing-data-file
Print warning when writing PairCoeff section in data file may not sufficiently reproduce all pair coefficients
2020-08-18 13:45:44 -04:00
c7f8a6d154 Add format line test to dump atom 2020-08-18 13:15:28 -04:00
216a016a08 Add simple tests for dump cfg 2020-08-18 12:37:16 -04:00
0d38a1418e Merge branch 'master' into warning-no-mixing-data-file 2020-08-18 12:24:01 -04:00
dae2cb2668 Merge pull request #2286 from weinbe2/fea-snap-ui-optim
Kokkos SNAP optimizations – Pre-computing Cayley-Klein parameters, symmetrized data layouts for host and device backends, reducing number of atomics
2020-08-18 11:55:46 -04:00
9c769fe90e Complete refactor of dump custom tests 2020-08-18 11:53:10 -04:00
6dfe2f3351 Minor code cleanup 2020-08-18 09:21:28 -06:00
d6ea2e9e9b More refactoring 2020-08-17 17:56:33 -04:00
e75ba02701 Merge remote-tracking branch 'origin/master' into refactor-reading 2020-08-17 17:36:01 -04:00
fa0aa7f8d2 Merge pull request #2291 from ThFriedrich/master
fix typos and indentations
2020-08-17 12:11:38 -04:00
23be41a1d3 fix typos and indentations 2020-08-16 04:43:07 +02:00
365d8f57f1 Refactor dump atom tests 2020-08-14 15:41:24 -04:00
3aee1b75b1 update README 2020-08-14 11:21:51 -04:00
1b60f876e0 Some refactoring of tests 2020-08-13 18:04:34 -04:00
dbcf66cf97 Increase coverage of dump custom 2020-08-13 17:41:06 -04:00
eab8652d3a Fix triclinic binary header in dump custom 2020-08-13 17:40:44 -04:00
2ba4778640 Add missing cleanup 2020-08-13 17:39:57 -04:00
0d2a280397 silence compiler warnings 2020-08-13 15:46:00 -04:00
fbcc97586f Update binary format of dump custom 2020-08-13 14:45:22 -04:00
71ec14087d Reduce code duplication in tests 2020-08-13 13:00:37 -04:00
1fb7ba9e4b Add tests for dump_custom 2020-08-13 12:35:47 -04:00
27e8ee7bd8 Fix typo 2020-08-13 12:34:16 -04:00
87a356a211 Add write_dump tests for dump atom 2020-08-13 12:04:54 -04:00
f9697bd9f5 Add optional TIME to binary dump atom format 2020-08-13 11:48:29 -04:00
6d725c9b1c Merge pull request #2287 from akohlmey/lattice-region-tester
Add unittest tool for lattice and region (/w create_box/create_atoms)
2020-08-13 11:47:08 -04:00
6d80435b51 Refactoring dump_atom.cpp 2020-08-13 11:35:05 -04:00
836ba01d51 Rename test_dump.cpp to test_dump_atom.cpp 2020-08-13 11:14:30 -04:00
7b0bfed01d Add failure tests to dump atom 2020-08-13 11:01:16 -04:00
6d825dcb6b Add UNITS information to dump atom binary format 2020-08-13 10:49:03 -04:00
1c2747739a Merge pull request #2284 from akohlmey/fix-tester
Add unit test tool for fixes that do time integration, thermostatting, force manipulations and similar
2020-08-13 10:23:29 -04:00
b27d63059c Add tests for units in dump atom 2020-08-13 10:22:46 -04:00
ba793f2e56 add region tests and a few more death tests for lattice commands 2020-08-12 22:16:50 -04:00
6eb6ab308b more tests for lattice command failures 2020-08-12 22:16:50 -04:00
f8c7c13168 complete lattice testers and start with regions+lattice+create_atoms 2020-08-12 22:16:50 -04:00
33118491a9 update custom lattice example for better syntax highlighting and remove unused lines 2020-08-12 22:16:50 -04:00
1cd2dfee3f add more lattices 2020-08-12 22:16:50 -04:00
5c5774c8a4 add check for compatible lattice command when calling create_atoms
without this check it is possibly to use the dimension keyword after
using lattice and then create atoms with an unsuitable lattice setting
2020-08-12 22:16:49 -04:00