Commit Graph

37842 Commits

Author SHA1 Message Date
60f1233b07 Merge branch 'lammps:develop' into create_atoms-overlap_w_mol 2024-01-10 19:55:18 -05:00
7ca2dcac62 Merge pull request #4034 from jorge-ramirez-upm/correct-fix-ave-correlate-long
Small correction to fix/ave/correlate/long to show the right output after a restart
2024-01-08 17:01:22 -05:00
1b6dc1fe8c Small correction to fix/ave/correlate/long to show the right output after a restart 2024-01-07 18:38:47 +01:00
1e9eb933be Merge pull request #4031 from stanmoore1/kk_pace_opt
Optimize Kokkos PACE pair style for GPUs
2024-01-05 02:48:45 -05:00
9d95c51b0b Merge branch 'develop' into kk_pace_opt
# Conflicts:
#	src/ML-PACE/compute_pace.cpp
2024-01-04 21:08:50 -05:00
0e2a065f6b Merge pull request #4003 from stanmoore1/kk_half_thread
Thread over neighbors in addition to atoms when using a half neighlist
2024-01-04 21:04:31 -05:00
3076f1c5f8 Merge pull request #4018 from akohlmey/collected-small-fixes
Collected small fixes and updates
2024-01-04 17:47:23 -05:00
e26a762f88 improve compatibility of oneapi.cmake preset 2024-01-04 11:21:38 -05:00
9d7582ec1b Small tweak for readability 2024-01-03 16:59:11 -07:00
55784019f7 Fix CPU issue 2024-01-03 16:46:06 -07:00
e00fc992fc skip python tests using numpy that fail randomly on macOS 2024-01-03 15:10:37 -07:00
4fbb913425 skip python tests using numpy that fail randomly on macOS 2024-01-03 15:07:41 -07:00
66a5f56682 whitespace 2024-01-03 14:13:11 -07:00
377450882e Port changes to pair_pace_extrapolation_kokkos, unify code 2024-01-03 14:10:29 -07:00
5020861cbc Fix compiler warnings 2024-01-03 13:22:52 -07:00
817c7bac18 Optimize Kokkos PACE pair style for GPUs 2024-01-03 10:11:30 -07:00
c1446ddd92 improve error messages 2024-01-02 11:02:59 -05:00
9546fd89e5 adjust heading levels 2023-12-23 12:16:53 -05:00
05bbb94345 add graph to show relation between branches and versions of LAMMPS 2023-12-23 12:06:38 -05:00
5d9f384338 recreate graphvis images with graphviz 8.1 2023-12-23 11:58:40 -05:00
b01065b398 use "neato" layout only for lammps-classes.dot to avoid issues with recent graphviz versions 2023-12-23 11:57:58 -05:00
bdb0fc6b7a replace non-ASCII character 2023-12-23 11:35:39 -05:00
0515f07172 whitespace 2023-12-23 03:00:11 -05:00
d080a1c218 Merge branch 'aip-water-update' of github.com:oywg11/lammps into collected-small-fixes 2023-12-23 02:46:55 -05:00
0822a49cfc Merge branch 'develop' into collected-small-fixes 2023-12-23 02:45:37 -05:00
35214120ad Merge pull request #4025 from oywg11/ilp-tmd-update
Add a new potential file for ilp/tmd
2023-12-22 21:06:27 -05:00
6a636d5491 Merge pull request #4023 from ndtrung81/unittest-debug
Updated the Developer unittest section for debugging failed unit tests individually
2023-12-22 19:59:14 -05:00
f147df8b44 add full list of atom pairs 2023-12-23 08:29:15 +08:00
6489e475b9 Merge pull request #4022 from akohlmey/cmap-fixes-for-charmm-gui
Corrections for fix cmap to be compatible with CMAP files created by CHARMM-GUI
2023-12-22 19:19:52 -05:00
4ea40ed2fd Merge branch 'ilp-tmd-update' of github.com:oywg11/lammps into collected-small-fixes 2023-12-22 14:45:43 -05:00
8cf958e241 Merge branch 'aip-water-update' of github.com:oywg11/lammps into collected-small-fixes 2023-12-22 14:44:27 -05:00
7cfbe77532 report incompatibility of verlet/split with INTEL package kspace styles 2023-12-22 13:42:56 -05:00
5b00ad8f71 flag error if using INTEL package kspace styles with run style verlet/split 2023-12-22 13:37:20 -05:00
c964d8cda8 skip python tests using numpy that fail randomly on macOS 2023-12-22 11:35:35 -05:00
efa37fff7f remove cached copy of "layout" since this was not always initialized when used 2023-12-22 11:31:31 -05:00
c4124c0995 correct statement about Xeon Phi support 2023-12-22 10:28:45 -05:00
a16a1a768c fix cut-n-paste bug and avoid uninitialized data access 2023-12-22 00:04:16 -05:00
f8495eaf75 make certain nbonds is initialized 2023-12-21 23:59:35 -05:00
2b31a2bed5 gracefully handle reaxff parameter files without hydrogen bond parameters 2023-12-21 16:07:58 -05:00
3b15594707 update citation comment 2023-12-21 15:58:29 -05:00
dedbd8f6db improvements from clang-tidy 2023-12-21 14:25:31 -05:00
b857cd9e39 update the doc file 2023-12-21 11:31:26 +08:00
b58203fc52 update the doc file 2023-12-21 10:44:03 +08:00
aa221e2f2b add new potential file for aip/water/2dm 2023-12-21 10:28:53 +08:00
86f87e0f7b Update docs 2023-12-19 10:46:41 -07:00
ab29200c60 More tuning 2023-12-19 10:26:52 -07:00
e98df7018b update the example files 2023-12-19 08:17:43 +08:00
6c798412b4 fix typo and remove unnecessary quotes 2023-12-18 18:52:42 -05:00
8e4871c5e1 Tune team params 2023-12-18 16:37:31 -07:00
af222711ae Added text to explain the output of ctest -V a bit more 2023-12-18 15:52:30 -06:00