Commit Graph

24912 Commits

Author SHA1 Message Date
62a152e4a2 get version number from package version instead of rewriting the __init__.py file 2021-02-09 14:13:18 -05:00
e7bcd1ea43 must purge python/build folder so we don't inherit outdated files 2021-02-09 14:12:43 -05:00
418135667f address a whole bunch of spelling issues that suddenly popped up. 2021-02-09 12:38:46 -05:00
653c296246 document __version__ module member and version check 2021-02-09 12:29:14 -05:00
65affd6f12 Merge branch 'master' into check-python-version-match 2021-02-09 11:44:29 -05:00
e706f75d17 fix permissions 2021-02-09 11:44:26 -05:00
b53b993c68 recover in-place usage by defaulting to version 0 and changing it back after installation 2021-02-09 02:12:37 -05:00
09edb26101 Merge pull request #2586 from akohlmey/collected-small-changes
Final small changes and bugfixes for the patch release.
2021-02-09 01:10:51 -05:00
86b3e8ba2a fix permisssions 2021-02-09 00:52:17 -05:00
7f338a17af fix whitespace 2021-02-09 00:42:30 -05:00
2d1f9646a3 update src/.gitignore 2021-02-09 00:40:55 -05:00
7826b58f73 add check to lammps python module to check consistent versions between module and shared library 2021-02-09 00:38:17 -05:00
1b48ac0eaf Merge branch 'master' into collected-small-changes 2021-02-08 22:46:21 -05:00
db26902393 Merge pull request #2560 from lammps/thermo-energy
Standardize fix contributions to energy and virial, remove THERMO_ENERGY mask
2021-02-08 22:45:23 -05:00
d2b3677d6f whitespace fixes 2021-02-08 21:45:58 -05:00
11866dfcb4 avoid segfault when accessing fix compute data before the fix is initialized 2021-02-08 21:20:25 -05:00
82dc03ab3d update examples and log files for cases affected by the fix_modify changes 2021-02-08 21:17:52 -05:00
6f08e81bf8 don't access uninitialized data and avoid shadowing a class member variable 2021-02-08 20:19:22 -05:00
5e55ab0e9b silence compiler warnings 2021-02-08 20:19:01 -05:00
72ce5c6238 Merge branch 'thermo-energy' of github.com:lammps/lammps into thermo-energy 2021-02-08 20:04:46 -05:00
a6aabc0a93 fix typo 2021-02-08 20:03:13 -05:00
56ae498814 reduce memory leakage in kspace style msm 2021-02-08 17:27:54 -05:00
c5bb414c37 remove dead code 2021-02-08 17:26:39 -05:00
0797d15219 Merge branch 'thermo-energy' of github.com:lammps/lammps into thermo-energy 2021-02-08 14:15:00 -07:00
6909cf9dd5 Uncomment Kokkos code 2021-02-08 14:14:38 -07:00
d42a165ccf Merge branch 'master' into collected-small-changes 2021-02-08 15:33:22 -05:00
33939a0e26 Merge branch 'master' into thermo-energy
# Conflicts:
#	doc/src/fix_ti_spring.rst
#	src/RIGID/fix_rigid_small.cpp
#	src/fix_langevin.cpp
#	src/fix_temp_berendsen.cpp
#	src/fix_temp_csld.cpp
#	src/fix_temp_csvr.cpp
#	src/fix_temp_rescale.cpp
#	src/thermo.cpp
2021-02-08 15:24:29 -05:00
ca1a5731e7 remove files left behind by accident 2021-02-08 12:32:27 -05:00
3d46b084e8 must include LAMMPS_MACHINE suffix when installing python package 2021-02-08 11:08:00 -05:00
b8282a1152 search for python 3.9 as preferred version as well 2021-02-08 11:07:13 -05:00
a3a84c4493 Merge pull request #2584 from jrgissing/bond-react_create_atoms
Bond/react: create atoms
2021-02-08 10:44:36 -05:00
01a05b88b4 avoid memory leak in unit test fixture 2021-02-08 10:43:18 -05:00
c810cda64c must free MPI communicators created by MPI_Comm_split() 2021-02-08 10:40:20 -05:00
92605393f7 correct initialization and memory leaks issues detected by valgrind 2021-02-08 10:39:59 -05:00
9cdacbdebd apply cast to first variable in sequence of multiplications 2021-02-07 21:18:54 -05:00
06e484d3e0 make flags for supporting GPU archs consistent, add ampere consumer GPU arch 2021-02-07 15:30:55 -05:00
8134296311 fix typo 2021-02-07 09:39:07 -05:00
5573d01079 Use typecast to silence CodeQL warnings 2021-02-06 18:18:52 -05:00
1609c498bc avoid integer overflow when computing memory usage 2021-02-06 18:15:48 -05:00
779bbd0853 avoid overflows when computing time or timestep related values 2021-02-06 18:15:24 -05:00
77402bdbc8 avoid overflows when computing memory offsets and allocating memory 2021-02-06 18:14:27 -05:00
1380b7b142 replace (temporary) long double with double. 2021-02-06 18:04:41 -05:00
26037982bc convert to double early when computing memory usage 2021-02-05 19:42:40 -05:00
12f49c4c89 avoid overflow when computing memory address offsets on 64-bit machines 2021-02-05 19:42:07 -05:00
e223ea3784 cast timestep related expressions to bigint before they can overflow 2021-02-05 19:41:17 -05:00
5036adeff0 timestep processing functions must use bigint instead of int 2021-02-05 19:23:05 -05:00
9995bef911 file permissions 2021-02-05 17:50:23 -05:00
19811077b7 fix strdup() vs utils::strdup() bug 2021-02-05 17:16:38 -05:00
960713be3b make recent change to fix ti/spring docs use mathjax 2021-02-05 17:01:28 -05:00
c74c3b3f22 update docs for mention CUDPP and MPS support with conventional make 2021-02-05 16:50:59 -05:00