Commit Graph

30736 Commits

Author SHA1 Message Date
deef9fae23 fix bug with wrong mapping of pair style classes 2022-04-30 19:15:00 -04:00
1b8641685a Merge pull request #3242 from dxhisboy/develop
Adding saip/metal/opt and ilp/tmd/opt
2022-04-30 12:59:41 -04:00
672c063fd8 add unit test for delete_atoms 2022-04-29 22:33:15 -04:00
2f599bace1 enable and apply clang-format 2022-04-29 22:01:34 -04:00
f5113aa84a better error messages 2022-04-29 21:59:37 -04:00
31d6af6114 add delete_atoms "variable" option 2022-04-29 21:59:22 -04:00
9c45af7730 avoid potential 32-bit integer overflow 2022-04-29 20:53:57 -04:00
cac9fcaf86 cannot build ELECTRODE package by default on native windows because it requires BLAS 2022-04-29 20:18:50 -04:00
4a3bcd9230 Merge branch 'develop' into collected-small-changes 2022-04-29 20:15:36 -04:00
87b0939fe7 Merge pull request #2871 from evoyiatzis/master
implementation of an "ellipsoidal" region option
2022-04-29 19:46:15 -04:00
44c4d0a4d6 Merge pull request #3194 from robeme/electrode
ELECTRODE package for constant potential method
2022-04-29 18:30:29 -04:00
ee8d8042e6 add example for YAML processing with Perl 2022-04-29 17:42:23 -04:00
514bfe77df apply changes suggested by @sjplimp 2022-04-29 17:33:37 -04:00
5e18f15435 remove unused variables 2022-04-29 15:29:04 -04:00
d0938ce398 apply clang-format 2022-04-29 15:13:47 -04:00
80c716b81f update false positives 2022-04-29 15:11:11 -04:00
f09e886fd2 remove unused function 2022-04-29 15:10:57 -04:00
47f62838db Merge branch 'develop' into electrode 2022-04-29 14:37:48 -04:00
3c71c07048 Merge pull request #3230 from athomps/snap-inner-mod
Snap inner cutoff improvements and porting to KOKKOS
2022-04-29 14:36:48 -04:00
37d2d9e013 Remove trailing spaces 2022-04-29 10:56:34 -06:00
3f44f8f50d Merge pull request #3236 from lammps/fix-adapt-angle2
bug fix for new fix adapt angle support
2022-04-29 12:50:10 -04:00
df76673bee bdim --> adim in fix adapt 2022-04-29 10:10:36 -06:00
2f8e708184 more whitespace 2022-04-29 09:37:27 -06:00
894b7810b2 whitespace 2022-04-29 09:32:24 -06:00
57098f3df7 Remove extra files 2022-04-29 09:22:14 -06:00
69a79ba082 whitespace 2022-04-29 09:17:24 -06:00
641e769bde Revert a3c6baad4c 2022-04-29 09:03:44 -06:00
435f652263 removed trailing whitespace in pair_ilp_tmd_opt and pair_saip_metal_opt 2022-04-29 22:54:41 +08:00
6ced400207 change saip and tmd to virtual public inherit, so that corresponding opt package can compile 2022-04-29 22:28:48 +08:00
f93ac86c53 updated Install.sh for OPT package to adopt new interlayer potential optimizations 2022-04-29 22:05:52 +08:00
943cb531bf Modified chunk code of pair_ilp_graphene_hbn_opt for adopting pair_saip_metal_opt and pair_ilp_tmd_opt 2022-04-29 21:56:52 +08:00
c34efcc718 fixed multielement assignment error
tested in CPU and GPU mode, gets same output for eneriges and forces as build without KOKKOS for various settings of sinner, dinner
2022-04-29 07:53:39 -06:00
2292caef38 updated sinner/dinner log output
now logmsg displays all element params for sinner, dinner on same line (replaces only first param + ...)
2022-04-29 07:48:02 -06:00
9c48a75c8e fix issues reported by coverity scan 2022-04-29 06:49:47 -04:00
b2300ba9cb Merge branch 'develop' into collected-small-changes 2022-04-29 05:51:05 -04:00
6fb3cef39f Merge pull request #3031 from Iximiel/develop
Second Moment Aproximation to the Tight Binding addes as pair style
2022-04-28 22:32:38 -04:00
cb41e354b8 Merge pull request #3238 from akohlmey/doc-math-funcs
Document special math functions
2022-04-28 22:11:09 -04:00
7d9cdc7ec4 update documentation. more examples. document fix_modify options 2022-04-28 18:34:49 -04:00
bf8f5e2f87 more compact output 2022-04-28 18:08:59 -04:00
a3e0e1a6eb fixed multielement assignment error 2022-04-28 15:57:53 -06:00
2ae9ca5073 swap rows and columns back for easier import into pandas 2022-04-28 16:03:04 -04:00
f25b60fded simplify pandas processing. add missing image with plot 2022-04-28 16:02:45 -04:00
f09556018b fix bugs reported by @jibril-b-coulibaly 2022-04-28 14:47:53 -04:00
04b46a9ce8 implement yaml output for mode vector 2022-04-28 14:33:15 -04:00
eb5d867adf Improve erfc 2022-04-28 13:45:57 +00:00
2f71c96bde add yaml format output for mode scalar 2022-04-28 07:46:47 -04:00
09ed718c14 add example to plot thermo data with pandas+matplotlib 2022-04-28 07:45:51 -04:00
cfc4dcea3d must quote keyword data to avoid issues parsing the YAML data 2022-04-28 07:34:23 -04:00
33a63e5cd3 remove dead code to silence compiler warnings 2022-04-28 03:03:29 -04:00
a05bdfa76c add override to polymorph functions 2022-04-27 18:36:00 -04:00