6f2076a9b8
update docs
2021-10-05 22:11:19 -04:00
b2c4f08bbc
use C++11 functionality to determine wall time
2021-10-05 21:52:52 -04:00
fcdabe0002
implement a platform neutral usleep() using C++11
2021-10-05 17:58:27 -04:00
528050aa08
use platform namespace to delete file
2021-10-05 17:57:38 -04:00
e3e82df995
port "embedded" shell commands to use platform functions
2021-10-05 16:36:06 -04:00
5128eb7b43
port read/write_restart to use the platform namespace
2021-10-05 16:35:37 -04:00
af070aa351
add support for seeking to the end of a file
2021-10-05 15:44:58 -04:00
741cf9c7d5
remove obsoleted include statements
2021-10-05 07:36:22 -04:00
0bdc6d47e0
port molfile plugin reader to platform namespace
2021-10-04 22:56:23 -04:00
ee594a879b
make use of platform::putenv()
2021-10-04 22:39:43 -04:00
40f683c1a7
use platform functions to handle piping help output to a pager when on a console
2021-10-04 18:14:21 -04:00
7cdd82dee2
use platform functions for averaging fixes
2021-10-04 18:13:46 -04:00
dd2b5b22d4
fix saed/vtk does not use the overwrite option anywhere
2021-10-04 17:22:58 -04:00
485796f387
Merge branch 'master' into platform-namespace
2021-10-04 15:19:12 -04:00
ab51c1bd3d
Merge pull request #2977 from akohlmey/collected-small-changes
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Collected small changes
2021-10-04 11:07:03 -07:00
c6a15064b3
Merge pull request #2976 from stanmoore1/update_gitignore
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Update .gitignore file in /src
2021-10-04 10:10:23 -07:00
6e54295b38
pre-built singularity images have been removed due to lack of interest
2021-10-04 11:34:28 -04:00
9d96e10048
silence compiler warning
2021-10-04 07:32:25 -04:00
dc2453a22b
silence some compiler warnings
2021-10-04 06:56:13 -04:00
5246cedda6
Fix misplaced MPI calls bug in pair style drip
2021-10-04 06:50:38 -04:00
203b779622
also update eigen download for traditional build
2021-10-02 23:17:08 -04:00
45ea2b0431
update eigen3 to the latest release and move download to our own server
2021-10-02 22:52:03 -04:00
03f7bf6649
update eigen3 to the latest release and move download to our own server
2021-10-02 22:44:29 -04:00
c341c2c6a9
correct platform call in kim query command
2021-10-02 20:00:53 -04:00
7110e1c15e
small format tweaks
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- brief description should not end in a dot as it becomes a title line
- add empty line to separate title from body of description
- revert order of file/path separator constants so that the Linux version shows up in doxygen
2021-10-02 18:28:33 -04:00
a6aa3fd3ee
apply clang-format
2021-10-02 18:26:46 -04:00
69a8dfe4d9
whitespace
2021-10-02 18:12:32 -04:00
dcaed72b6d
update embedded docs
2021-10-02 17:29:21 -04:00
c6bdab8b4c
disable optimization of cputime function for MSVC++ to avoid bogus 0s reports
2021-10-02 17:29:05 -04:00
2dcaa47b0e
unfreeze versions of python packages used to build the documentation
2021-10-02 16:55:19 -04:00
37bfe3d0ce
integrate platform sub-namespace into source code and documentation
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this updates function calls to functions that have been moved from
the utils namepsace or the Info class to platform::
2021-10-02 16:55:11 -04:00
373dbcd9ae
fix typo
2021-10-02 16:40:05 -04:00
35bef7b1d3
unfreeze versions of python packages used to build the documentation
2021-10-02 16:32:58 -04:00
195fe81c60
correct test for loading shared objects and libraries
2021-10-01 23:52:02 -04:00
a8193f42b8
Merge branch 'master' into platform-namespace
2021-10-01 21:58:52 -04:00
0cbf70a385
make compatible with C
2021-10-01 15:24:59 -04:00
60c6669d68
Remove lammpsplugin.h from .gitignore
2021-10-01 13:21:42 -06:00
cf06620538
raise the C++ standard to be at least C++14 when Kokkos is enabled.
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This still allows to request a later standard for as long as it is C++14 or later
2021-10-01 15:16:40 -04:00
139dfd89e2
for improved C++20 compatibility
2021-10-01 15:14:53 -04:00
cc2d08506e
accelerator_*.h files should not be ignored
2021-10-01 12:55:39 -06:00
bed1ff9a95
Remove more files from .gitignore
2021-10-01 12:46:06 -06:00
61c465c6f3
simplify creation of computes in fix ipi and fix plumed
2021-10-01 14:32:19 -04:00
7e7b8acf4b
Update .gitignore
2021-10-01 12:12:53 -06:00
05b368e1c6
Merge pull request #2971 from lammps/doc-thermostats
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Clarify thermostat doc pages to mention applying the thermostat only to regions of atoms
2021-10-01 12:18:38 -04:00
912d55c46a
Merge pull request #2975 from rbberger/external_kokkos_fix
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Avoid assertions in PythonCapabilities check when using external KOKKOS
2021-10-01 11:56:43 -04:00
dcf4b75ca2
Merge pull request #2973 from akohlmey/32bit-pointer-bugfix
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32-bit pointer bugfix in bond/angle style gaussian
2021-10-01 11:36:26 -04:00
211df8b7b0
Avoid assertions in PythonCapabilities check when using external KOKKOS
2021-10-01 11:08:02 -04:00
434c170097
apply clang-format
2021-10-01 00:58:38 -04:00
01fb33cb5d
fix memory allocation bug causing memory corruption on 32-bit arches
2021-10-01 00:57:02 -04:00
b5b2f5c03c
additional tweak
2021-09-30 17:11:49 -06:00
