Commit Graph

32556 Commits

Author SHA1 Message Date
756d24ff9e Implemented vector-style variables in C, Python, and Fortran APIs; unit test and more for Fortran/extract_variable 2022-09-30 16:02:26 -05:00
8ee17edcab Implemented more unit tests; stuck on atomfile 2022-09-29 23:39:39 -05:00
a7071fea78 Wrote docs for extract_fix,extract_variable; fixed python so it knows about string variables; doc typo fixes; part of extract_variable unit test 2022-09-29 19:28:15 -05:00
3ab8f6ea16 Finished docs for everything currently implemented 2022-09-29 09:14:49 -05:00
6c0da8cbaf Wrote documentation for extract_fix, extract_variable 2022-09-29 01:07:46 -05:00
1d4297e2dd Implemented extract_fix, extract_variable, flush_buffers; unit test for extract_fix 2022-09-28 22:09:26 -05:00
e22699197d Added flush_buffers 2022-09-28 07:40:06 -05:00
6109090d40 Merge branch 'lammps:develop' into fortran-further-tinkering 2022-09-27 20:02:06 -05:00
2072e08624 added get_last_error_message; still working on its unit test 2022-09-26 21:56:03 -05:00
be98b5a168 Merge pull request #3458 from Boogie3D/mliappy_unified
MLIAP Unified Interface
2022-09-26 20:33:17 -04:00
1dc3c8fc26 remove hippynn examples 2022-09-26 19:56:00 -04:00
10068a0fde Merge pull request #3461 from julient31/llg-correction
Correction of some LL features in the SPIN package
2022-09-26 14:56:36 -04:00
1eb3d50c22 simplify/modernize 2022-09-26 13:38:35 -04:00
5ea37448b6 whitespace 2022-09-26 13:12:04 -04:00
a4796dd872 Merge pull request #3396 from hammondkd/fortran-tinkering
Expanding the Fortran interface
2022-09-26 13:02:30 -04:00
1072a5bda2 Added unit test for has_error 2022-09-26 09:21:41 -05:00
28d84b4fcb Missed wrap_extract_compute.cpp in prior commit 2022-09-26 08:57:32 -05:00
7cd5d7b357 Added lammps_has_error 2022-09-26 08:57:03 -05:00
30ddb2d4b4 Merge branch 'clean-master2' of github.com:julient31/lammps into llg-correction 2022-09-26 07:53:09 +02:00
e24b4bec01 Adding a new test problem for large damping in the LL equation. 2022-09-26 07:49:51 +02:00
ac6cb062e6 Completing the correction in fix langevin/spin. 2022-09-26 07:44:32 +02:00
90f26f05fc Correcting some aspects of the SPIN package documentation. 2022-09-26 07:43:19 +02:00
bada1fb348 Finished extract_compute and its unit tests and documentation 2022-09-25 23:54:18 -05:00
7b7237bdaf try to suppress creating __pycache__ folders in the python source dirs 2022-09-24 22:27:22 -04:00
19a0747aeb add unit test for MLIAP unified 2022-09-24 22:15:29 -04:00
ebf69f2e79 avoid incorrect results with ghostneigh_flag on by skipping contributions from non-local i atoms 2022-09-24 21:09:27 -04:00
0ed0d757ec refactor unified LJ example input to embed the python code into the input 2022-09-24 21:08:43 -04:00
59ca352e48 whitespace 2022-09-24 15:34:41 -04:00
a02ab6eaa1 avoid memory corruption when using mliap unified with ghostneigh_flag == 1 2022-09-24 15:32:25 -04:00
ef8090fdd1 flag *unified* keyword as newly added in the next patch release 2022-09-24 15:31:47 -04:00
bab115e993 apply C++11 virtual/override conventions 2022-09-24 14:48:31 -04:00
1885f7e42d delete redundant memory deallocation 2022-09-24 14:48:13 -04:00
1ad782c050 initialize and (conditionally) free cutghost pointer in base class 2022-09-24 14:47:41 -04:00
058e49696a Added "New in version TBD" to new functions 2022-09-24 12:12:24 -05:00
26e269aacd continued ork on extract_compute unit tests 2022-09-24 12:04:27 -05:00
e469c98e9d apply clang-format 2022-09-24 04:39:02 -04:00
a31977ca4c fix typo 2022-09-24 04:24:43 -04:00
46820a90c5 modernize and improve error message handling 2022-09-24 04:12:54 -04:00
5ddb0aeb16 cosmetic changes 2022-09-24 03:44:19 -04:00
f1756eeeee update unified LJ Ar example to include creating the pickle in the input 2022-09-24 03:33:19 -04:00
c7b24cb1e3 always accept "mliappy" and "unified" keywords, but print suitable error if not supported 2022-09-24 03:32:35 -04:00
c581fca39a Merge branch 'develop' into mliappy_unified 2022-09-24 03:07:31 -04:00
49a3be17cb c-library functions should be always present, documented, and lowercase 2022-09-24 03:07:24 -04:00
69627eee8d Merged with fortran-tinkering 2022-09-23 22:11:24 -05:00
8ad478697e Remove trailing whitespace 2022-09-23 17:20:27 -06:00
a3326841ad Add MLIAP NumPy Ta06A example 2022-09-23 17:01:59 -06:00
a94cfe175b add c/python unit tests for lammps_error() 2022-09-23 18:59:29 -04:00
597540dfb4 Merge branch 'mliappy_unified' of github.com:Boogie3D/lammps into mliappy_unified 2022-09-23 16:51:29 -06:00
5aad045686 Improve incompatible python interpreter warning 2022-09-23 16:51:20 -06:00
9eee1bbb5f Fix MLIAP Unified LJ example logs 2022-09-23 16:04:15 -06:00