Commit Graph

29512 Commits

Author SHA1 Message Date
8d5a59c0fa Switched all command and class names from pressure to stress 2022-03-07 11:27:37 -07:00
c2b0347b30 Added notes on similarity between these computes 2022-03-07 09:09:29 -07:00
8f10953e92 Small comma error in citation 2022-03-07 10:27:23 +01:00
c8b7fc2144 Added cross-reference to compute pressure/cartesian 2022-03-06 20:19:38 -07:00
6da4db4d7e Merge branch 'compute_pressure_cartesian_and_spherical' of github.com:olavgal/lammps into compute_pressure_cartesian_and_spherical 2022-03-06 20:11:20 -07:00
e857b923bc Added representative output to log files 2022-03-06 20:11:10 -07:00
793db836d9 update .gitignore 2022-03-06 19:55:11 -05:00
aaa51d6fc6 optimizations and avoiding floating point exceptions 2022-03-06 11:04:51 -05:00
2f5f36cff8 move examples to a more appropriate folder. add logfiles 2022-03-06 11:03:57 -05:00
44e3874541 Changed citations 2022-03-06 12:50:25 +01:00
fac3ce4507 example files for pressure/cartesian/cylinder/spherical 2022-03-06 12:43:37 +01:00
ece25a95ad stability improvements: recompute bin width for perfect match, don't test for floating point identity 2022-03-05 13:46:56 -05:00
15fa6049f2 update comments 2022-03-05 12:33:54 -05:00
43ac557a9b remove unused headers and dead code. reformat a few small items 2022-03-05 12:31:36 -05:00
c24e46c547 don't apply modulus to doubles but integers 2022-03-05 12:30:40 -05:00
9a98817567 reformat doc page and address spelling issues 2022-03-05 11:35:37 -05:00
99d29ea86a Added kinetic contribution to pressure/cylinder and clang-format on all 2022-03-05 16:30:47 +01:00
089e46a540 Fixed some gramma 2022-03-05 16:29:42 +01:00
4e125ccfc6 Combined pressure profile documentation into one page 2022-03-05 16:22:11 +01:00
b3bef9cd34 Merged 2022-03-05 10:30:38 +01:00
9ea0c581ac Adding kinetic contribution to prssure/cylinder 2022-03-05 10:25:28 +01:00
c9563d0814 Fixed style changes 2022-03-04 22:30:25 +01:00
1e530dbd19 Changed ref name to avoid duplicate 2022-03-04 20:55:29 +01:00
23580d8ca5 Integrated pressure/cartesian and pressure/spherical 2022-03-04 20:54:33 +01:00
98d2dca83f Trailing whitespace 2022-03-04 16:58:31 +01:00
6d48ba1577 Trailing whitespace 2022-03-04 16:57:59 +01:00
a7112f173a Trailing whitespace 2022-03-04 16:56:39 +01:00
9f0607876a LAMMPS Homepage 2022-03-04 16:49:42 +01:00
47de1234c0 LAMMPS homepage and ø->{\o} in reference 2022-03-04 16:49:03 +01:00
2687228f09 Fixed LAMMPS homepage and changed ø to {\o} it reference 2022-03-04 16:47:16 +01:00
a396ed2b36 Fixed LAMMPS homepage 2022-03-04 16:45:31 +01:00
760d85b9c4 Two computes that computes the local mechanical pressure tensor in Cartesian and spherical coordinates 2022-03-04 16:04:18 +01:00
798975b809 Merge pull request #3155 from akohlmey/collected-small-changes
Collected small changes
2022-02-28 15:18:27 -05:00
9f315fc2e2 small rewording 2022-02-28 12:17:20 -05:00
763f8f432f Merge pull request #3156 from stanmoore1/kk_verlet_uvm
Fix rare bug in Kokkos with CUDA UVM
2022-02-28 12:16:28 -05:00
bd4d1b52f9 Merge branch 'develop' into collected-small-changes 2022-02-27 19:33:04 -05:00
b76a7764fd use new API to get access to intel fix 2022-02-27 15:19:34 -05:00
0ddefb3754 trigger building an intel style neighbor list so that buffers are allocated 2022-02-27 14:51:17 -05:00
bc9e45ca5a use consistent names, avoid memory leaks, fix off-by-1 error in fourier dihedral 2022-02-27 12:24:37 -05:00
7824e43339 Change Update::reset_timestep() API so that rerun can bypass the time depended fix check 2022-02-27 11:35:34 -05:00
e287ef6ff9 Merge pull request #3154 from akohlmey/use-setuptools
Refactor python/install.py and 'make install-python' to use setuptools and build a binary wheel
2022-02-27 11:32:05 -05:00
750e0435a8 add link to code design page and update/clarify a couple of things 2022-02-27 11:29:20 -05:00
94f97be6e9 link Modify overview paragraph to Code design page 2022-02-27 11:29:19 -05:00
06f4ae0f1f ignore wheel files 2022-02-27 07:03:02 -05:00
0be14d4ed8 move basename operation from setup.py to install.py 2022-02-27 07:02:39 -05:00
7c11d1675d fix bug with make install 2022-02-27 06:33:22 -05:00
7fd41bea6a add some comments to the refactored scripts to explain technical details 2022-02-25 20:10:13 -05:00
014ad94479 Fix rare bug in Kokkos with CUDA UVM 2022-02-25 16:45:58 -07:00
11ba2adbe7 add support for plumed 2.6.6, 2.7.4, and 2.8.0 (default 2.7.4) 2022-02-25 16:34:37 -05:00
1dbff92eeb spelling 2022-02-25 16:23:48 -05:00