Commit Graph

43360 Commits

Author SHA1 Message Date
8df9f3404b Merge pull request #4467 from evoyiatzis/patch-2
extend fix adapt to treat improper angles
2025-04-02 12:18:40 -04:00
92321f4cad Merge pull request #4521 from stanmoore1/kk_update_4.6.0
Update Kokkos library in LAMMPS to v4.6.0
2025-04-02 11:30:17 -04:00
9f7653dd37 Merge pull request #4519 from fxcoudert/extxyz2
Add extended XYZ dump style extxyz
2025-04-02 10:59:18 -04:00
8defe0e798 Merge pull request #4482 from rbberger/dihedral_multi_harmonic_kokkos
add dihedral multi/harmonic/kk
2025-04-01 21:37:51 -04:00
5933eca83f Merge pull request #4515 from akohlmey/collected-small-fixes
Collected small fixes and updates
2025-04-01 21:16:16 -04:00
5371aa8670 Merge pull request #4335 from jrgissing/bond/react-molmap_option
Bond/react: molmap option
2025-04-01 21:14:19 -04:00
144637c0a1 Merge pull request #4523 from evoyiatzis/patch-7
enable lj96/cut, lj/cubic and lj/gromacs with fix adapt
2025-04-01 21:12:09 -04:00
618c92aeee fix typos 2025-04-01 19:25:48 -04:00
b0ca9ed0d4 enable lj/cubic for fix adapt 2025-04-01 16:19:37 +02:00
76e3900128 add line in the end of pair_lj_gromacs.cpp 2025-04-01 15:38:50 +02:00
db8dae3300 enable lj/gromacs for fix adapt 2025-04-01 15:36:44 +02:00
c99ae613de enable lj96 for fix adapt 2025-04-01 11:34:11 +02:00
6964156b6f fix syntax error 2025-04-01 00:00:22 -04:00
e577528099 switch CWD to home if default is "/" or contains "AppData" 2025-03-31 23:47:45 -04:00
bba860f959 Update docs for KOKKOS update 2025-03-31 12:36:40 -06:00
a4f7c7e4c5 Update CMake for KOKKOS package 2025-03-31 12:29:08 -06:00
3b69cf6011 Merge branch 'develop' of github.com:lammps/lammps into kk_update_4.6.0 2025-03-31 11:46:30 -06:00
9d2b5302b9 modernize some error messages 2025-03-31 01:28:25 -04:00
1c609ef3e4 cosmetic, more LAMMPS style 2025-03-30 23:37:11 -04:00
677e8dd681 documentation fixes 2025-03-30 23:35:45 -04:00
6e395424bc better align with LAMMPS' programming conventions 2025-03-30 23:30:15 -04:00
935e323d08 Merge branch 'develop' into bond/react-molmap_option 2025-03-30 23:27:50 -04:00
2396668965 Merge remote-tracking branch 'github/develop' into collected-small-fixes 2025-03-29 16:31:17 -04:00
285baf27b5 Merge pull request #4518 from akohlmey/file-formats
Add a general description of common file formats in LAMMPS
2025-03-29 16:30:31 -04:00
7ff9ee51e5 small tweaks 2025-03-29 15:56:34 -04:00
990007c87b whitespace, rewrap, and comments 2025-03-28 23:55:38 -04:00
4dbf18e2c9 small suggested changes 2025-03-28 23:15:33 -04:00
1172a8c6c8 Merge pull request #4506 from fxcoudert/mac
Update macOS info
2025-03-28 18:50:45 -04:00
aeed7a425f we only need to worry about Python3 now 2025-03-28 18:25:42 -04:00
b7b9a4a599 Update Kokkos library in LAMMPS to v4.6.0 2025-03-28 15:29:14 -06:00
9661c21052 comment out possible additional sections 2025-03-28 09:56:06 -04:00
c0321b5f00 More doc 2025-03-28 10:58:54 +01:00
9a55856758 forgot handling addstep_compute in setup() 2025-03-28 00:32:28 -04:00
09242c0b12 forgot handling addstep_compute in setup() 2025-03-28 00:31:01 -04:00
a17ec2a8d3 fix bug with addstep_compute skipping on first step 2025-03-28 00:18:32 -04:00
0263774595 must use addstep_compute() on next time based or variable step dump output 2025-03-28 00:17:59 -04:00
9ac09e839f trigger computes only if next variable step or time based dump present 2025-03-28 00:05:14 -04:00
963083b2d5 must use addstep_compute() on next variable dump output 2025-03-27 23:50:37 -04:00
8949a6262d Use "Contact the LAMMPS developers" consistently and add an errorurl() to such errors 2025-03-27 19:04:32 -04:00
c3309bc0b3 error message and programming style updates 2025-03-27 18:35:40 -04:00
c9be07df9c fix bug with addstep_compute skipping on first step 2025-03-27 18:28:06 -04:00
fc78806bc7 apply clang-format 2025-03-27 17:14:35 -04:00
f652687a3a add support for outputting the same temperature, pressure, and potential energy as the thermo output 2025-03-27 17:14:06 -04:00
738fb4a502 add info about restart files 2025-03-27 16:29:13 -04:00
d12f4b076b Dump pe, temp, press 2025-03-27 21:05:38 +01:00
032c1c39b0 Handle mass better 2025-03-27 20:14:29 +01:00
fce3246439 detect misformatted Sphinx directives 2025-03-27 13:37:13 -04:00
c9d557a9f2 add test for version related tags missing a colon 2025-03-27 13:20:08 -04:00
8eceb2b944 small updates and clarifications 2025-03-27 12:52:48 -04:00
dcb844b01b Safer printf 2025-03-27 17:27:08 +01:00