Commit Graph

38709 Commits

Author SHA1 Message Date
94a95b56e6 Merge remote-tracking branch 'github/develop' into collected-small-changes 2024-04-16 22:42:48 -04:00
329d546eea Merge pull request #4078 from jmgoff/pace-mliap
Update ML-IAP for ACE support
2024-04-16 22:42:17 -04:00
27266e72c4 Merge pull request #3984 from lammps/general-triclinic
Add suppport for general triclinic simulation boxes and systems
2024-04-16 21:04:59 -04:00
98eb345615 small tweak 2024-04-16 20:07:30 -04:00
95e4364400 breathe is currently not compatible with sphinx 7.3 2024-04-16 19:59:30 -04:00
124516097c breathe is currently not compatible with sphinx 7.3 2024-04-16 19:53:00 -04:00
9aceecdfa4 breathe is currently not compatible with sphinx 7.3 2024-04-16 19:51:01 -04:00
89d98786ec small doc formatting and spelling fixes 2024-04-16 19:33:14 -04:00
c855e44d0e small doc fixes 2024-04-16 19:26:51 -04:00
28620a6631 propagate changes to other EAM implementations 2024-04-15 21:04:57 -04:00
8dd1d12a73 apply clang-format and whitespace cleanup 2024-04-15 21:04:22 -04:00
16e5fce31e adjust error messaging for rho[i] > rhomax in EAM 2024-04-15 17:24:47 -06:00
1924a06466 Merge branch 'develop' into collected-small-changes
# Conflicts:
#	python/lammps/pylammps.py
2024-04-15 17:21:38 -04:00
de8b1b49a6 Merge pull request #4135 from yuhldr/develop
pylammps small changes and bugfixes
2024-04-15 14:13:20 -04:00
d34a9bd33e Merge pull request #4113 from evoyiatzis/restricted-angle
Restricted squared cosine angle and dihedral potentials
2024-04-15 13:13:11 -04:00
b2fded3933 restore missing line 2024-04-15 11:24:54 -04:00
3a94e4df2d print single warning when some rho[i] exceeded rhomax of the current EAM potential 2024-04-15 02:50:16 -04:00
a9b9f7f2c7 correct fix ttm/mod example input 2024-04-15 01:45:05 -04:00
e4a7b193aa whitespace 2024-04-14 21:11:03 -04:00
yuh
f6992c0d34 doc: 3 py:meth:PyLammps.append_cmd_history()
Co-authored-by: Axel Kohlmeyer <akohlmey@gmail.com>
2024-04-15 09:00:24 +08:00
yuh
bad5fcc9c4 doc: 2 py:meth:PyLammps.append_cmd_history()
Co-authored-by: Axel Kohlmeyer <akohlmey@gmail.com>
2024-04-15 09:00:05 +08:00
yuh
90c8c3c551 doc: py:meth:PyLammps.append_cmd_history()
Co-authored-by: Axel Kohlmeyer <akohlmey@gmail.com>
2024-04-15 08:59:02 +08:00
962219a446 make PyLammps mass property compatible with per-atom masses. 2024-04-14 18:27:17 -04:00
18d45d1ff0 pylammps: fix get atom.mass by atom.type 2024-04-14 18:17:36 -04:00
cc721816df pylammps: append_cmd_history 2024-04-14 17:17:36 +08:00
db1598fb08 pylammps: fix get atom.mass by atom.type 2024-04-14 17:02:23 +08:00
1346be4168 Merge pull request #4126 from lammps/global-vector-access
Relax error check on accessing fixes that produce variable size vectors/arrays
2024-04-13 16:58:50 -04:00
5af3626cf7 adjust test coeffs to be numerically stable 2024-04-13 11:43:30 -04:00
b5c5b8ea8d remove dead code and related comment 2024-04-13 11:43:00 -04:00
23ce978702 cosmetic 2024-04-13 11:07:46 -04:00
17d04ce41a Merge remote-tracking branch 'github/develop' into restricted-angle 2024-04-13 02:45:53 -04:00
95779b3504 add versionadded tags 2024-04-13 02:39:54 -04:00
a40b97d417 Merge remote-tracking branch 'github/develop' into collected-small-changes 2024-04-13 01:45:29 -04:00
5fbd21e324 Merge pull request #4127 from stanmoore1/kk_sort_by_key
Improve Kokkos sorting
2024-04-13 01:44:50 -04:00
7f68620fa9 add example with more compact initialization for scatter 2024-04-12 23:46:35 -04:00
4bd983ce6a make warnings in scatter/gather into errors 2024-04-12 23:11:56 -04:00
441a521d8b initialize all class pointers to null 2024-04-11 23:52:34 -04:00
f557dfdebb mention typelabel paper 2024-04-11 23:36:11 -04:00
9f2cc1e38b Add two-level sort to simplify algorithm 2024-04-10 17:24:08 -06:00
9ca47a36d2 Merge pull request #4129 from akohlmey/pedone-potentials
Add pair style for analytic form of Pedone potential non-Coulomb
2024-04-10 18:51:19 -04:00
b36f49c34c adjust epsilon for arm64 platform 2024-04-10 18:05:21 -04:00
9d3e9c6146 whitespace 2024-04-10 18:03:01 -04:00
dbb23b6006 Merge branch 'develop' into pedone-potentials 2024-04-10 18:02:31 -04:00
c3be4fa399 Merge pull request #4130 from akohlmey/update-file-variable-parsing
Modernize parsing of files for file and atomfile variables
2024-04-10 17:54:29 -04:00
3bfe8b88f6 Merge branch 'general-triclinic' of github.com:lammps/lammps into general-triclinic 2024-04-10 12:56:52 -06:00
120b861f80 correct typos and remove duplicate text 2024-04-10 12:56:43 -06:00
e180527f08 fix typo 2024-04-10 12:35:09 -04:00
7ca4bf05cf change radthresh initialization 2024-04-10 09:52:58 -04:00
83cd20dfeb Merge branch 'develop' into general-triclinic 2024-04-10 08:42:25 -04:00
06d579eb51 improve atomfile variable docs 2024-04-10 06:29:10 -04:00