Commit Graph

41790 Commits

Author SHA1 Message Date
9cb67de38f Merge branch 'develop' of github.com:lammps/lammps into kk_bug_fixes 2025-01-20 15:50:48 -07:00
29397b4a44 Fix more issues in fix langevin/kk pointed out by @ndtrung81
Co-authored-by: Trung Nguyen <ndactrung@gmail.com>
Co-authored-by: Stan Moore <stanmoore1@gmail.com>
2025-01-20 15:50:21 -07:00
ffa4765b15 Merge pull request #4241 from gsalkuin/develop
Add new fix to compute force and torque due to electric potential
2025-01-14 20:33:10 -05:00
89370efe39 Merge branch 'develop' into develop 2025-01-14 19:12:14 -05:00
906399b14f Merge pull request #3 from srtee/efield_lepton_updates
Efield lepton updates
2025-01-14 19:11:09 -05:00
bbb7d86614 Merge pull request #4410 from soniasalomoni/pair_d3
pair_style d3 - D3 dispersion corrections
2025-01-14 18:21:52 -05:00
0fe7fbdb42 Merge branch 'develop' into pair_d3 2025-01-14 16:05:29 -05:00
b27aa31baa fix whitespace 2025-01-14 22:35:56 +10:00
276b8d9c93 streamline Lepton variable update process with ptr-vectors 2025-01-14 22:31:42 +10:00
1f7533029b deduplicate force and torque calculations 2025-01-14 22:08:16 +10:00
edb068c43f Merge pull request #4426 from akohlmey/update-to-fmtlib-11.1
Update embedded fmtlib copy to version 11.1
2025-01-14 01:24:57 -05:00
31d1addfad Merge pull request #4434 from akohlmey/collected-small-changes
Collected small changes and fixes
2025-01-14 00:41:10 -05:00
7b9f7be485 replace vecs with arrays since size known at compile-time; make phi and dphi flagging uniform 2025-01-14 14:47:33 +10:00
7c8c8c9d01 update patch for WHAM code 2025-01-13 22:07:44 -05:00
b56b8a016a Merge pull request #2 from akohlmey/efield_lepton_updates
Fix efield/lepton updates
2025-01-13 20:40:17 -05:00
c2868c448e Merge remote-tracking branch 'github/develop' into collected-small-changes 2025-01-13 20:34:14 -05:00
754517dcf6 Merge branch 'collected-small-changes' of github.com:akohlmey/lammps into collected-small-changes 2025-01-13 20:32:01 -05:00
6d7926a026 add missing lammps_expand() function 2025-01-13 19:13:34 -05:00
663f812799 fix inconsistent backquotes 2025-01-13 19:05:04 -05:00
55a3b28f7d replace CR-LF with LF 2025-01-13 16:19:40 -05:00
8705a14b35 create logs for example input 2025-01-13 16:18:24 -05:00
ec669676d0 remove unused variables 2025-01-13 16:11:14 -05:00
742c869534 Merge branch 'develop' into gsalkuin/develop 2025-01-13 16:08:18 -05:00
be048fc636 cosmetic changes 2025-01-13 16:01:18 -05:00
ddff545a4c Merge pull request #4431 from Becksteinlab/imd-v3-integration
Interactive Molecular Dynamics [IMD] Version 3 implementation
2025-01-13 15:59:41 -05:00
62aa803d53 order list of removed commands and packages in reverse order of their removal date
also add an (automatic) table of contents simplify finding something
2025-01-13 12:03:31 -05:00
a22c58cd47 add missing update to invoked_bonds in ComputeReaxFFAtomKokkos 2025-01-13 00:17:05 -07:00
686326a999 Merge remote-tracking branch 'github/develop' into collected-small-changes 2025-01-13 01:05:48 -05:00
528770f07d Merge pull request #4344 from lammps/cmake-cpp-std-deprecation
Prepare development branch for requiring C++17 and deprecating GNU make support for some packages
2025-01-13 01:05:07 -05:00
d692a99e4d print PyLammps deprecation warning only once and only from MPI rank 0 2025-01-13 00:04:14 -05:00
dd6fea3fcd Merge branch 'develop' into cmake-cpp-std-deprecation 2025-01-12 23:54:50 -05:00
e20f3ec874 macOS does not like forward declarations for standard C++ classes 2025-01-12 23:50:33 -05:00
f50edb5a38 Merge pull request #4369 from rbberger/deprecate_pylammps
Python interface updates
2025-01-12 23:30:22 -05:00
0aadc4cf46 use mutex to avoid race condition when accessing thermo data during run 2025-01-12 23:27:17 -05:00
78850efaed also warn that KOKKOS will end support for legacy builds in Summer 2025 2025-01-12 21:57:25 -05:00
7c990f8b0e improve wording 2025-01-12 21:56:54 -05:00
2df402c4ff Merge branch 'develop' into cmake-cpp-std-deprecation 2025-01-12 21:47:02 -05:00
906117ff47 We no longer support Intel icc version 19 or older. Clean up checks/flags. 2025-01-12 21:46:04 -05:00
c476e6704b revert workarounds for Intel ICC 19.x 2025-01-12 20:13:24 -05:00
4519489f8b fix unit test and another workaround for intel compilers 2025-01-12 19:42:03 -05:00
c8a46fe4ce make better use for std calls and improve error messages 2025-01-12 17:48:50 -05:00
943504fd98 move timespec2seconds exception handling to calling function 2025-01-12 17:48:20 -05:00
60b10c1588 Merge remote-tracking branch 'github/develop' into update-to-fmtlib-11.1 2025-01-12 16:52:56 -05:00
f34ae8a011 simplify 2025-01-12 16:49:49 -05:00
296f1ab29f alternate attempts to work around intel icc 19 limitations 2025-01-12 16:43:37 -05:00
7b60abf569 add LAMMPS customization for Intel compilers 2025-01-12 16:11:50 -05:00
9e4a51d568 add bugfixes with update to version 11.1.2 2025-01-12 15:41:37 -05:00
a5c3305c42 sync with lammps tutorials paper description 2025-01-12 15:09:42 -05:00
85dec585a6 add tests for lammps_eval() and its python counterpart 2025-01-12 14:49:07 -05:00
dce1231052 add a lammps_eval() function to the C library interface and all derived wrappers 2025-01-12 00:39:18 -05:00