Commit Graph

14281 Commits

Author SHA1 Message Date
a19e8fb269 Merge branch 'master' into resetids 2018-03-30 09:15:24 -06:00
81caeffb38 Merge pull request #855 from lammps/dumpinc
new dump_modify refresh and compute displace/atom refresh commands fo…
2018-03-30 09:07:19 -06:00
a4795df5f9 complete integration of reset_ids into the documentation build system 2018-03-30 10:49:38 -04:00
ef8423918a fix typo 2018-03-29 17:04:53 -04:00
0984e94c04 Merge pull request #858 from junghans/fix_return
MathSpecial::fm_exp: fix return value on ppc64
2018-03-29 08:11:33 -06:00
2a930dac42 Merge pull request #856 from akohlmey/fix_srp_bugfix
Bugfix for SRP with triclinic cells
2018-03-29 08:10:55 -06:00
09313cf3b5 shift files into doc/src 2018-03-28 13:35:13 -06:00
6dff29bb9c remove files that were added in error last summer by a pull request 2018-03-28 13:52:07 -04:00
c664f46b31 MathSpecial::fm_exp: fix return value on ppc64 2018-03-28 11:51:04 -06:00
5fd17670b1 new reset_ids command and dump_modify delay option 2018-03-28 11:31:35 -06:00
b37664b44e squash bug in fix srp that was incorrectly comparing cutoffs for triclinic cells 2018-03-28 10:57:13 -04:00
b5b0f67bcd Merge pull request #852 from akohlmey/collected-small-bugfixes-and-updates
Collected small bugfixes and cleanups
2018-03-27 15:43:57 -06:00
a524d8c193 Merge pull request #854 from lammps/readdump
new option *add keep* added to read_dump
2018-03-27 14:39:35 -06:00
b571f5423a Merge pull request #850 from lammps/addlib
a few new lib interface methods
2018-03-27 14:39:16 -06:00
2aef3a0e96 new dump_modify refresh and compute displace/atom refresh commands for incremental dump files 2018-03-27 14:37:04 -06:00
da9f63210e rephrase error message, remove trailing whitespace 2018-03-27 13:59:21 -04:00
e8b8428f6b new option *add keep* added to read_dump 2018-03-27 10:08:58 -06:00
1956d93af9 doc tweak on added lib functions 2018-03-27 09:58:53 -06:00
48509622fe fix bug reported in issue #851 2018-03-26 11:51:00 -04:00
f38169f19c do not capitalize library.cpp, even if it is at the beginning of a sentence 2018-03-23 16:08:40 -04:00
24e48760da Merge pull request #845 from akohlmey/dummy-pair-restart-warning
More consistent and transparent handling for force styles with restarts
2018-03-23 13:47:43 -06:00
b5ee713779 Merge pull request #849 from stanmoore1/kk_deprecated
Remove deprecated Kokkos code
2018-03-23 13:42:39 -06:00
e73663d1de Merge pull request #847 from akohlmey/collected-small-changes
Collected small changes and bugfixes
2018-03-23 13:41:22 -06:00
5770a59ead Merge pull request #846 from akohlmey/pdf-manual-reorg
Refactor PDF Manual Structure
2018-03-23 13:40:35 -06:00
db5a6b272b Merge pull request #842 from martok/meamc-bugfix
MEAM/C Improvements/fixes
2018-03-23 13:40:14 -06:00
318877ada3 Merge pull request #839 from oywg11/master
New registry dependent interlayer potential in LAMMPS
2018-03-23 13:38:48 -06:00
d14c16a47c a few new lib interface methods 2018-03-23 13:34:22 -06:00
5a341bee09 minor cleanup in docs and updated log files for kolmogorov/crespi/full 2018-03-23 06:42:04 -04:00
78e09e1854 refine the code and documentation 2018-03-23 13:26:40 +03:00
c398eb6b57 update kolmogorov-crespi examples 2018-03-22 19:42:07 -04:00
8de7c449fc refactor code and examples to match LAMMPS conventions. whitespace cleanup. shorten examples. 2018-03-22 19:31:41 -04:00
04c968362f fix up and integrate documentation for contributed pair styles 2018-03-22 18:20:19 -04:00
a6d10ba91d Remove deprecated Kokkos code 2018-03-22 11:19:17 -06:00
b2194d617b update logs for eff and reax 2018-03-21 21:26:46 -04:00
8bbefb6187 more meaningful output for electron units. fix bug in time unit to fs conversion 2018-03-21 20:12:14 -04:00
07a8e31623 update BOP input and log files 2018-03-21 19:45:52 -04:00
9f785a4f0b detect and error out on unsupported/old bop potential files 2018-03-21 19:40:25 -04:00
a19f550c1e update the bop potential file and input 2018-03-21 19:40:03 -04:00
a585871251 update logfiles 2018-03-21 19:04:06 -04:00
ad87b632ef update spc/e data and reax/c input 2018-03-21 19:03:02 -04:00
57dbad59c0 update missing data files and adjust input files for potentials comparison 2018-03-21 16:03:21 -04:00
96061b854b Merge branch 'compute_chunk_atom_pbc' of https://github.com/poppik/lammps into collected-small-changes 2018-03-21 15:34:05 -04:00
c58bc6fcba Fixed pbc wrapping in case of spherical bins 2018-03-21 21:20:15 +03:00
e66c71e1ca fix linker error bug with fftw3 and -DFFT_SINGLE 2018-03-21 12:13:09 -04:00
1a402d4002 refactor headline levels to result in a more structured PDF manual 2018-03-20 15:42:13 -04:00
69ca8e5503 print a message about the restored atom style 2018-03-19 18:57:28 -04:00
5cdc6097f4 abort with an error when a pair style incorrectly advertises a restart ability 2018-03-19 18:25:18 -04:00
28a922b18b print error message when a pair style was not re-specified after reading a restart 2018-03-19 18:05:47 -04:00
16054cc327 print names of restored force field styles to screen and logfile 2018-03-19 18:04:08 -04:00
3c94f7d5d1 add pointer Force class to temporarily hold the name of the restarted pair style 2018-03-19 18:03:13 -04:00