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ee25ed3897
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update/correct documentation for memory pool classes
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2020-09-08 16:36:48 -04:00 |
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9f4a991fc5
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move over doxygen comments for a few LAMMPS classes
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2020-09-08 16:36:29 -04:00 |
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1273179d03
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Fix compile error
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2020-09-08 13:42:25 -06:00 |
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9e47452382
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recover compilation for platforms using malloc() instead of posix_memalign()
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2020-09-08 15:36:21 -04:00 |
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7a9d31328e
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remove obsolete comment
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2020-09-08 15:29:42 -04:00 |
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4f8e627479
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QEq refactor
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2020-09-08 13:16:45 -06:00 |
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9f7e309f07
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small updates to MyPage and convert MyPoolChunk similar to MyPage
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2020-09-08 15:13:16 -04:00 |
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a3cc7581b1
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rename test for memory pools
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2020-09-08 15:12:08 -04:00 |
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f72e5b6d13
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Typo
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2020-09-08 12:52:32 -06:00 |
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b008ba5ecb
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Merge remote-tracking branch 'origin/master' into cmake_clean_up
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2020-09-08 12:51:49 -06:00 |
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9f8b8529b1
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Merge pull request #2348 from akohlmey/use-tabs-with-html
Enable sphinx-tabs extension with the html version of the documentation
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2020-09-08 12:02:43 -04:00 |
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22fac9affc
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more doc update
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2020-09-08 09:49:07 -06:00 |
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8fb13f4fd1
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cmake: make doc more consistent
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2020-09-08 09:43:21 -06:00 |
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5df3deb8e6
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update/refactor a few more build documentation files for using tabs
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2020-09-08 11:40:21 -04:00 |
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09b8b117fc
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cmake: consistent usage of find variable
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2020-09-08 09:35:45 -06:00 |
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88cc673f78
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more use of tabs in Build_extras.rst
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2020-09-08 10:11:37 -04:00 |
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dd20776915
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fix spelling issues
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2020-09-07 21:17:56 -04:00 |
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9b01d5bf95
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revise and add tabs to some sections
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2020-09-07 21:08:47 -04:00 |
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9afba50d01
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update for zstd support
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2020-09-07 21:00:45 -04:00 |
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f02db43f63
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add discussion and minimal code example for MyPage class.
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2020-09-07 16:10:48 -04:00 |
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0ee7c5f434
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add more MyPage test variants
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2020-09-07 15:27:13 -04:00 |
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ab5c81f7d6
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refactor some more to reduce redundant code.
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2020-09-07 08:57:37 -04:00 |
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bbb81a8dd0
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add unit tester for MyPage class
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2020-09-07 08:33:05 -04:00 |
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3089205a54
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tweak MyPage docs
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2020-09-07 08:32:34 -04:00 |
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0447616aaf
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address spelling issues
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2020-09-07 08:03:41 -04:00 |
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f8ebcc90fb
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define OneCoeff struct in my_page.h as HyperOneCoeff to resolve compilation issues
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2020-09-07 07:57:23 -04:00 |
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f329d56495
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updated pg_developer.rst
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2020-09-06 20:12:38 -07:00 |
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a57a1404f3
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bug fix fix unit tests, improve doc readability, and to prevent accidentally allocating memory on the heap. (Note: All of these changes are related to "jacobi3()". That function instantiates Jacobi without allocating memory on the heap, and this created some headaches. The original code at https://github/jewettaij/jacobi_pd does not have this feature, and the unit tests there do not test for these kinds of errors. Hopefully this commit fixes everything.)
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2020-09-06 20:05:47 -07:00 |
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2270d86519
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whitespace cleanup and try to recover legacy build
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2020-09-06 22:51:58 -04:00 |
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4ca36d9526
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add doxygen docs and convert MyPage template class from header only to header plus implementation
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2020-09-06 22:26:17 -04:00 |
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485a169ef2
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move merge sort to utils namespace
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2020-09-06 17:38:53 -04:00 |
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19ce59ba38
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use tabs for CMake vs. GNU make in LAMMPS library linking page
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2020-09-06 16:50:28 -04:00 |
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d77f08d5fb
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tweak formatting to look better in the PDF file
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2020-09-06 16:49:58 -04:00 |
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fabf762fa8
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reverting to previous version of util.h and util.cpp
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2020-09-06 11:09:36 -07:00 |
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eb6f7f9740
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Merge branch 'master' into math_eigen
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2020-09-06 10:59:20 -07:00 |
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d97e8d8cbf
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fixed linker problems in "utils.h" and "utils.cpp"
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2020-09-06 10:12:07 -07:00 |
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b29522273a
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changed the "trim_and_count_words()" function declaration in "utils.h" to make sphinx happy. Fixed some new spelling mistakes.
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2020-09-06 09:40:28 -07:00 |
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9f24f056ff
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reformat system sizes information and make explanations more concise
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2020-09-06 07:12:43 -04:00 |
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77e22c90ac
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complete using tab/tabs directives in Build_settings
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2020-09-06 06:11:12 -04:00 |
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5536c1e6ee
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make more compact
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2020-09-06 06:10:39 -04:00 |
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2ee2009356
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removed assert() statements from "superpose3d.h"
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2020-09-06 02:30:20 -07:00 |
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c16321e9d3
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purged greek characters from "pd_developer.rst"
I replaced the 'Σ' character that was causing problems with PDF generation with the word "sum". Hopefully PDF documentation generation works now.
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2020-09-05 21:44:32 -07:00 |
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77789f9ed8
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small tweaks
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2020-09-06 00:07:53 -04:00 |
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7b6d07a812
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load sphinx extension for content in tabs with html and for transforming them to admonitions for non-html builders
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2020-09-05 23:54:10 -04:00 |
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4ad6d99ca0
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updated documentation files: "pg_developer.rst", "math_eigen.h", and "false_positives.txt"
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2020-09-05 20:08:45 -07:00 |
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7cb774e6bc
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some corrections before rewriting the doxygen comments to comply with LAMMPS doxygen style.
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2020-09-05 16:37:15 -07:00 |
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4b66414bdf
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fixed a type error in math_eigen.h
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2020-09-05 10:38:14 -07:00 |
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58fa72ddc5
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replaced all numerical recipes jacobi() code with code from "math_eigen.h". moved "math_eigen.h" into the main "src" directory.
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2020-09-05 10:19:19 -07:00 |
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57f82abae3
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updated all code in LAMMPS to use the open-source "math_eigen.h" instead of "math_extra.h". Code in "lib" now uses its own abbreviated local version of the "math_eigen.h" file (which is named "jacobi_pd.h"), since it is not clear how code from "lib/" can access the code in "src/"
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2020-09-05 01:39:27 -07:00 |
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d995ed0d87
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Merge pull request #2344 from akohlmey/use-improved-sphinx-fortran
Use modernized version of sphinx-fortran
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2020-09-04 18:46:34 -04:00 |
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