Commit Graph

23688 Commits

Author SHA1 Message Date
75a119d534 divert installation of sphinx-fortran to github branch with parallel read capable version 2020-09-04 17:40:26 -04:00
64728678f1 Merge branch 'python_interface_guide' of github.com:rbberger/lammps into python_interface_guide 2020-09-04 17:15:58 -04:00
96db122377 Add Python coverage collection if enabled 2020-09-04 17:15:51 -04:00
176f7c064d Merge branch 'master' into python_interface_guide 2020-09-04 15:51:56 -04:00
e6592d2324 Merge pull request #2336 from akohlmey/collected-small-changes
Collected small changes for the next patch release
2020-09-04 15:22:31 -04:00
6a40eba2ae Add Ubuntu 20.04 Intel OpenCL container 2020-09-04 15:03:53 -04:00
da0e60c173 Apply changes to remaining containers 2020-09-04 14:43:03 -04:00
f6abdf97c4 Remove -j in distribution container files 2020-09-04 14:28:03 -04:00
41a1c96e06 Update other GPU containers 2020-09-04 14:19:41 -04:00
3bdfbdcf09 Update Ubuntu 18.04 GPU container and add Ubuntu 20.04 2020-09-04 14:06:38 -04:00
ceed9284c1 Merge branch 'master' into collected-small-changes 2020-09-04 13:32:47 -04:00
de777ce994 Merge pull request #2341 from akohlmey/doc-updates
Revised links and related descriptions in the manual
2020-09-04 13:29:58 -04:00
41a3e7c712 update a few links in the programmer guide 2020-09-04 11:59:04 -04:00
60d25c2eea Update Ubuntu 20.04 container 2020-09-04 11:54:08 -04:00
5c22d1197e Merge branch 'master' into doc-updates 2020-09-04 11:50:28 -04:00
d0d3cee28d a few more cosmetic changes 2020-09-04 11:50:02 -04:00
598819229b Fix missing OpenKIM models for testing due to KIM-API packaging 2020-09-04 11:47:38 -04:00
64d3be27a6 Add zstd to containers 2020-09-04 11:46:40 -04:00
90c13b1b14 update build files for plumed 2.6.1 release 2020-09-04 11:44:39 -04:00
7ea4177626 Set Plumed version to 2.6.1 2020-09-04 11:41:44 -04:00
2b1e4749dd first chunk of revised updates to the manual addressing link issues. 2020-09-04 11:39:38 -04:00
c8327e66b3 Merge pull request #2338 from akohlmey/include-cleanup
Update list of included headers for latest updates of the convention
2020-09-04 10:14:12 -04:00
f19ce32bf5 a few more small tweaks 2020-09-04 09:42:11 -04:00
255bf2f8fd update iwyu custom mapping file 2020-09-04 09:41:57 -04:00
f541647d44 some more IWYU tweaks 2020-09-04 09:23:20 -04:00
d6ba95bed6 minor tweaks 2020-09-04 08:05:59 -04:00
2d802411e9 remove pointless stringstream abuse 2020-09-04 08:03:53 -04:00
91a87b745f final second round IWYU cleanup 2020-09-04 08:01:11 -04:00
63e5ca53ef add iwyu mappings for gtest and gmock 2020-09-04 08:00:38 -04:00
bb7447363c more include cleanup and IWYU tweaks 2020-09-04 07:22:39 -04:00
7f6fc8a003 updated math_eigen.h and moved it into the main "src" directory 2020-09-04 04:10:47 -07:00
fc3d9fee5e more USER-OMP updates 2020-09-04 01:32:52 -04:00
d0691d0a5d add mapping for Eigen3 includes 2020-09-04 01:32:15 -04:00
2e0af2fdce some more second pass cleanup 2020-09-04 00:46:23 -04:00
508b49c976 add missing comma 2020-09-04 00:45:41 -04:00
87dfdb8723 add comments/warnings to docs of fix property/atom and fix store/state about restarting 2020-09-04 00:14:01 -04:00
cb618e19d1 small tweak to address formal issues 2020-09-03 18:30:35 -04:00
18cea11100 Merge pull request #66 from junghans/include-cleanup
cmake: use static iwyu-extra-map.imp
2020-09-03 18:27:00 -04:00
5a7189e95f update note for write_data command on missing coefficient data. 2020-09-03 18:24:12 -04:00
ce78be864a move date2num() convernience function from Universe class to utils namespace 2020-09-03 17:47:45 -04:00
390c6ba106 rechecking some corefiles with IWYU after the many updates 2020-09-03 15:28:07 -04:00
93d0358ebc cmake: use static iwyu-extra-map.imp 2020-09-03 11:36:02 -06:00
05c7cfe59f more include updates for USER-OMP 2020-09-03 11:16:32 -04:00
f67bd8eb5d more KOKKOS, USER-OMP, and USER-INTEL include file cleanup 2020-09-03 10:54:06 -04:00
27203304d6 USER-INTEL include handling cleanup 2020-09-03 09:47:48 -04:00
88ddfa4eb0 more IWYU cleanup in packages 2020-09-03 05:20:02 -04:00
55704368d0 include updates for commonly used packages 2020-09-03 01:45:05 -04:00
c7c4297cfc update include handling for commands 2020-09-03 00:51:58 -04:00
c2cf19bdd4 fixes for file readers 2020-09-03 00:32:57 -04:00
baa79bd1c4 add another iwyu-mapping entry 2020-09-03 00:22:28 -04:00