Commit Graph

23936 Commits

Author SHA1 Message Date
aaae3da12a Update comment 2020-11-13 17:52:37 -05:00
7500d902da Shorten constant names and move to force.h 2020-11-13 17:15:40 -05:00
f24320d26a Introduce enums for energy and virial flags 2020-11-11 22:09:03 -05:00
c0a101192e Merge pull request #2471 from akohlmey/collected-small-changes
Collected small fixes and updates
2020-11-11 11:20:32 -05:00
2f21ef6322 Merge pull request #2466 from rbberger/bugfixes
Collection of bugfixes
2020-11-11 11:19:52 -05:00
2acb0aaedd fix typo that has propagated to multiple pair style doc files 2020-11-10 05:00:56 -05:00
d55eeefc32 Undo change in library interface breaking compatibility 2020-11-09 13:47:27 -05:00
6056171b45 Merge pull request #2451 from akohlmey/update-fmtlib
Update bundled fmtlib to version 7.1.2
2020-11-09 13:10:37 -05:00
773a31a628 improve read_dump and rerun documentation. mention that native binary dumps are not supported 2020-11-06 17:30:08 -05:00
c68829f17d update granular pair style example to comply to tighter history fix requirements 2020-11-06 17:17:18 -05:00
c2b9b6d57b fix bug using the wrong flag variable and print warning only if a change was made 2020-11-06 17:14:48 -05:00
3ea395615a update fmtlib version 7.1.1 to 7.1.2 2020-11-04 10:54:20 -05:00
c24f7acdd0 Avoid passing invalid pointer during integrator creation 2020-11-02 11:00:36 -05:00
0e8e93b2a0 Add space for readability 2020-11-02 10:59:33 -05:00
e8337fd128 Safeguard against possible string overflow 2020-11-02 10:52:59 -05:00
7020418589 update fmtlib version 7.1.0 to 7.1.1 2020-11-02 10:31:46 -05:00
b1de97a3cd abort with an error if Pair::single() cannot work for granular pair style 2020-11-01 16:10:16 -05:00
0b51bba75c avoid division by zero 2020-11-01 16:09:30 -05:00
4e147632be simplify call to replace_fix() 2020-11-01 16:08:57 -05:00
6e64ce7228 add Modify::replace_fix() convenience function 2020-11-01 16:05:41 -05:00
2dc80e9521 avoid crash in the case of checking an empty potential file 2020-11-01 15:19:52 -05:00
4dac7625c5 error out instead of segfaulting when calling Pair::single() on pair style granular without active history 2020-11-01 14:53:33 -05:00
66ed16760f do not allow access to rigid body properties before they are fully set up 2020-10-31 11:48:29 -04:00
980fce06de pretty 2020-10-30 13:21:01 -04:00
756e979545 update DOIs for new stable release. fix URLs. 2020-10-29 21:38:01 -04:00
584943fc92 Merge pull request #2458 from akohlmey/next_lammps_version
Step version string for next LAMMPS release
patch_29Oct2020 stable_29Oct2020
2020-10-28 19:53:36 -04:00
00ef63049a Merge pull request #2456 from akohlmey/final-changes-for-stable
Final changes for stable release
2020-10-28 18:46:51 -04:00
f55c24ff96 Merge pull request #2455 from stanmoore1/relax_NaN
Add non-numeric pressure check to fix box/relax
2020-10-28 17:37:42 -04:00
4f9ec11311 Merge pull request #2448 from akohlmey/fix-read-dump-issues
Fix a couple issues related to read dump
2020-10-28 17:15:26 -04:00
bf87c0dc56 add (incomplete) unit test for atom style template 2020-10-28 15:43:36 -04:00
9f1526c66d cannot currently use replicate command with atom style template 2020-10-28 15:42:50 -04:00
c25ef8edb0 fix segfault: must not count bonds on atoms that are not in a molecule 2020-10-28 15:11:19 -04:00
72f4650b52 Merge pull request #2460 from stanmoore1/kk_bugfix
Kokkos bugfix for pair forward comm
2020-10-28 12:46:46 -04:00
99c99e86e0 Kokkos bugfix for pair forward comm 2020-10-28 09:15:49 -06:00
94462bfb48 do not add langevin thermostat forces and torques if disabled, e.g. in 2d system.
Note that fix rigid/small does not support the force or torque options and thus
the zeroing has to be done directly when computing the langevin data.
2020-10-28 10:41:20 -04:00
d2c6c89ccc step version string for next LAMMPS release 2020-10-28 08:09:23 -04:00
94f57d8849 rephrase paragraph about availability of the manual and add note about browser compatibility 2020-10-28 04:49:09 -04:00
9a3f935c9b do not include polyfill.js anymore 2020-10-27 20:17:59 -04:00
5dc09ae3c0 increase timeout, properly handle timeouts, and fix symbol lookup in exception handling 2020-10-27 17:16:47 -04:00
6f66f5b23b Add non-numeric pressure check to fix box/relax 2020-10-27 13:55:50 -06:00
e38dcb9302 Merge branch 'master' into fix-read-dump-issues 2020-10-27 13:06:52 -04:00
5872b05e2f Merge pull request #2447 from akohlmey/atom-style-template-fixes
Fix bugs and update implementation of atom style template
2020-10-27 13:03:05 -04:00
b8e84d0070 Merge pull request #2442 from ProfessorMiller/master
Create logic in parsing KIM Simulator Models to treat periodic vs. aperiodic simulations differently
2020-10-27 11:44:20 -04:00
3b267430ac Merge pull request #2452 from jrgissing/bond_react-small-docs-updates
Bond/react: docs clarifications
2020-10-27 11:03:46 -04:00
86f8b566f0 eliminate TABs 2020-10-27 00:39:52 -04:00
8976cf0230 Update data.spce
The masses were assigned wrongly in the data file (although they eventually get overwritten in the in.gcmc.h2o script)
2020-10-27 00:35:51 -04:00
a3c887accb update examples and include restart example, too. 2020-10-27 00:31:25 -04:00
6af2da7603 Correct path for icons and .desktop file 2020-10-26 23:56:55 -04:00
4a853cd838 Merge branch 'master' into atom-style-template-fixes 2020-10-26 23:56:48 -04:00
af483ca34f small documentation update 2020-10-26 23:15:43 -04:00