Commit Graph

3892 Commits

Author SHA1 Message Date
f7dc70a986 add new error/warning messages to documentation 2020-01-21 16:05:55 -05:00
a6f59a8607 Merge remote-tracking branch 'github/master' into Ncreate_atoms
# Conflicts:
#	src/create_atoms.cpp
2020-01-21 15:52:01 -05:00
90ff2eb6c9 modified versions of creating atoms on subset of lattice, ditto for set type/fraction 2020-01-21 13:31:47 -07:00
4ea679dd54 Merge branch 'master' into nparticles 2020-01-21 13:26:03 -07:00
405eb63a51 update sphinx extension to automatically pad lists to fill tables and avoid errors processing the documentation 2020-01-21 11:39:29 -05:00
3db920b8a6 fix minor issues with docs 2020-01-20 17:03:54 -05:00
12de17621f Merge branch 'master' into collected-small-changes
# Conflicts:
#	doc/src/Commands_fix.rst
2020-01-20 16:59:42 -05:00
795a872bf3 Merge pull request #1847 from pdebuyl/fix-active
Add fix propel/self
2020-01-20 16:57:04 -05:00
f03cfba029 Merge pull request #1820 from ornladios/adios_read_dump
Support read_dump with dump style 'adios'
2020-01-20 16:27:09 -05:00
44a814ec1d Added 'timeout <value>' option to the adios reader, so that a rerun can concurrently run with the first simulation 2020-01-20 15:52:21 -05:00
8ed271f16f change mode of propel/self to quat instead of quaternion 2020-01-20 17:41:20 +01:00
a1864f8bfd Fix commands table 2020-01-20 10:11:34 -05:00
95b4613e16 Added documentation for 'read_dump ... format adios' command and fixed links and names for 'dump atom/adios' and 'dump custom/adios' commands. 2020-01-20 09:23:35 -05:00
43c184983e Fix lj/cut/tip4p/long/gpu name in docs 2020-01-20 03:39:16 +03:00
5e740c9cc5 documentation and examples cleanup for fix propel/self
- rename example folder
- remove .txt format docs
- remove obsolete fix active sources
- update readme in src/USER-MISC
- replace non-ASCII characters and fix spelling issues
2020-01-19 13:29:52 -05:00
4c8a857960 Merge branch 'master' into fix-active-rebase-5 2020-01-17 22:11:55 +01:00
2c86c79dbb correct issue with command table for fix styles 2020-01-16 14:04:48 -05:00
ef2ac8aa26 convert updated docs to rst and remove .txt sources 2020-01-16 14:04:14 -05:00
9f018b9aa2 make list of fixes have a multiple of 6 number of entries 2020-01-15 17:40:51 -05:00
f1c79fb914 Merge pull request #1096 from ProfessorMiller/master
Changes to the NH fix enabling Cauchy stress control (Cauhchystat) du…
2020-01-15 17:35:03 -05:00
3efc5b0b64 Merge pull request #1841 from phankl/stable
Mesoscopic potential for carbon nanotubes
2020-01-15 16:31:40 -05:00
90d5f7be01 Merge remote-tracking branch 'cntmeso/stable' into ph-cntmeso
# Conflicts:
#	doc/src/pair_mesocnt.rst
2020-01-15 13:54:37 -05:00
34bc3b1b2e changed documentation format to .rst 2020-01-15 18:23:45 +00:00
51f41d4559 add missing rst format doc file 2020-01-15 13:05:28 -05:00
97bcce77d3 update documentation to rst format and integrate into lists/tables 2020-01-15 11:52:49 -05:00
2f1e3d8490 Merge branch 'master' into ph-cntmeso
# Conflicts:
#	doc/src/pairs.txt
2020-01-15 11:45:14 -05:00
a8d27efbe7 fixed typos in documenation, added words to false positives for spell check 2020-01-15 14:33:52 +00:00
198a40ada6 fixed typo in documentation 2020-01-15 11:43:11 +00:00
9ef984daaa added documentation 2020-01-15 11:04:43 +00:00
ded3354fa9 add comments about thread safety to the library howto 2020-01-14 15:04:17 -05:00
7f0373afa3 fix typo 2020-01-14 14:51:00 -05:00
be8832be99 Merge branch 'master' into nparticles 2020-01-14 12:36:02 -07:00
b9c6e0f700 Merge pull request #1691 from toquydong/stochasticwall
Implementation of statistical gas wall boundary conditions
2020-01-14 14:11:16 -05:00
75b2066506 correct spelling issues 2020-01-14 13:34:19 -05:00
660264855a update rst documentation for fix hyper/local 2020-01-14 13:27:35 -05:00
ea24ec8d6a minor formatting edits 2020-01-14 09:15:05 -07:00
95a3abc74e Merge branch 'master' into fire 2020-01-14 08:53:40 -07:00
02c99d1554 convert documentation to rst format and remove corresponding txt files 2020-01-14 10:14:39 -05:00
7c591b9b62 list new fix in overview lists and tables 2020-01-13 23:03:24 -05:00
146e6faad4 add rst version of doc file 2020-01-13 22:58:56 -05:00
d3348371e1 refactoring of code and doc files 2020-01-13 15:22:02 -07:00
51efee43be sync to master 2020-01-13 13:42:05 -07:00
9ed987c255 minor changes to syntax and documentation of fix deposit orient 2020-01-13 13:15:17 -07:00
e8d11931ec merged in current master 2020-01-13 10:34:31 -07:00
88448ef950 update rst docs since .txt file is gone 2020-01-13 10:57:36 -05:00
2834965e98 Merge branch 'master' into fft
# Conflicts:
#	doc/txt/kspace_style.txt
2020-01-13 10:53:26 -05:00
6813ab4c9c Merge pull request #1832 from akohlmey/doc-styles-check
Check style command lists against existing styles in sources
2020-01-13 10:38:26 -05:00
eed85bb676 Merge pull request #1834 from akohlmey/suffix-flag-refactor
Small Suffix flag refactoring and disallow per substyle special overrides for USER-INTEL and GPU
2020-01-13 10:37:35 -05:00
bfaea66e66 update documentation 2020-01-12 23:03:45 -05:00
15603e0ff7 add documentation for including cufft with KOKKOS+CUDA (for conventional build, CMake is automatic) 2020-01-12 21:46:02 -05:00