Commit Graph

18544 Commits

Author SHA1 Message Date
26dcb649bb remove redundant check 2022-06-13 22:10:51 -04:00
423c511d7a use explicit scoping in destructor 2022-06-13 22:10:43 -04:00
ea48dd3019 avoid file pointer leakage in dump reader base class. 2022-06-13 22:01:30 -04:00
407e015c80 more doc page edits for enhanced fix mdi/qm command 2022-06-13 15:46:58 -06:00
33f4bb525b remove redundant condition 2022-06-13 17:43:40 -04:00
2084e18ad2 Removing junk copied during write_data 2022-06-13 12:46:29 -06:00
2638213a5c Fixing documentation and adding colname to local 2022-06-13 11:04:28 -06:00
9ac17d2ff8 Commit of Pair MEAM WIP Kokkos port. Currently compiles but does not work. 2022-06-13 09:19:24 -07:00
ed702aab05 update for renamed style names 2022-06-10 13:00:36 -04:00
82185046ae Merge pull request #3293 from stanmoore1/compute_ave_sphere_atom
Fix issues in compute ave/sphere/atom
2022-06-10 12:57:35 -04:00
1ee35bea61 fix shake stats (again) 2022-06-10 01:41:14 -04:00
322bf1ef47 compute energy due to restraint forces during minimization. output stats. 2022-06-09 23:44:46 -04:00
41a34a4988 reaxff/species delete keyword 2022-06-09 23:22:16 -04:00
495418158a Clarify doc page 2022-06-09 15:51:31 -06:00
5d7b1f3ebb fix small issues 2022-06-09 15:36:17 -06:00
80727e47f4 Add attribution 2022-06-09 15:31:48 -06:00
9be6e2a064 Use COM velocity 2022-06-09 15:29:40 -06:00
7f1e76b7a5 Don't compute count twice 2022-06-09 14:53:44 -06:00
302287e4d0 debug comment for extending preconditioner neigh list 2022-06-09 14:19:53 -06:00
dd0bb0725d Merge branch 'develop' into shake-with-minimize 2022-06-09 15:31:39 -04:00
8427697caf Merge branch 'develop' into amoeba 2022-06-09 13:19:12 -06:00
081aa2629f Minor changes 2022-06-09 00:50:03 -06:00
174219383a Merge pull request #3290 from akohlmey/collected-small-changes
Collected small bugfixes and changes and plugin building improvements
2022-06-08 20:13:22 -04:00
42694ba640 reduce warnings when compiling with KOKKOS 2022-06-07 19:39:36 -04:00
7aec2e10bf Remove nlistghosts, store inum+gnum in natomneigh 2022-06-07 16:18:27 -06:00
d7680dd785 Fix int32 overflow in Kokkos ReaxFF 2022-06-07 10:11:39 -06:00
c07d61d392 Progress towards supporting ghosts in neighbor list 2022-06-07 02:16:06 -06:00
96b5a706da apply clang-format 2022-06-06 21:39:10 -04:00
880382e26a Compute snap array contains force indices in last columns. 2022-06-06 17:43:47 -06:00
67d367e714 Fix copy/paste bug 2022-06-06 15:28:40 -07:00
7e77b61042 simplify 2022-06-06 15:23:03 -07:00
5c68fe6e81 Fix issues in compute ave/sphere/atom 2022-06-06 15:15:47 -07:00
ce646a3859 Working derivative extraction. 2022-06-06 15:26:52 -06:00
8f773be2d6 must open files for xtc dump in binary mode 2022-06-06 15:01:25 -04:00
43a01b4fe4 Adding option to forward nbond, useful for fixes that need bondcounts 2022-06-06 11:18:11 -06:00
49e04d5643 Removing unnecessary variables in compute nbond 2022-06-06 10:33:22 -06:00
b05d96078a Adding extra property vector to bonds 2022-06-06 10:10:43 -06:00
786ca53e84 added lots of debug messages 2022-06-05 13:29:33 +01:00
b338781f88 cosmetic 2022-06-05 06:52:15 -04:00
c3d57760fe fixed zero-size memory allocation for empty chainlist 2022-06-04 20:35:06 +01:00
515b4d196e fixed nan issue in segment-segment friction 2022-06-04 14:39:22 +01:00
0dc486c90b fix bug introduced during stringification 2022-06-04 05:00:28 -04:00
539b92dd86 Merge branch 'lammps:develop' into mesocnt_stable 2022-06-04 08:56:21 +01:00
dba18c1c8d moved mode check to compute loop rather than neighbor list creation 2022-06-03 19:15:30 +01:00
f9b5679c00 remove unused function arguments 2022-06-03 07:16:19 -04:00
ee1dfa4a85 Merge branch 'develop' into shake-with-minimize 2022-06-02 23:08:17 -04:00
ceb9466172 Merge pull request #3283 from akohlmey/next_patch_release
Step version strings for next patch release
2022-06-02 21:22:16 -04:00
2da61d69a1 Merge pull request #3289 from akohlmey/collected-small-changes
A few last minutes updates and fixes for the next patch release
2022-06-02 20:16:39 -04:00
31f7798720 Merge pull request #3278 from yury-lysogorskiy/feature/ml-pace-multispecies
ML_PACE package hybrid support and small updates
2022-06-02 19:27:53 -04:00
4913c72795 Merge pull request #3288 from olavgal/clean_stress_cartesian
Clean stress cartesian
2022-06-02 17:19:19 -04:00