Commit Graph

32822 Commits

Author SHA1 Message Date
b51c50294e implemented create_atoms and encode_image_flags and unit tests for them; added IMGMASK and friends to extract_setting and unit tests for them; wrote documentation for them 2022-10-19 18:40:12 -05:00
9a732ba513 Fortran implementation of create_atoms + unittests 2022-10-19 09:56:54 -05:00
b44e353d4a Merge pull request #3489 from hammondkd/doc-fixes
Doc fixes (round 4)
2022-10-17 22:36:55 -04:00
7ac70cedd9 Merge pull request #3488 from weinbe2/feature/tersoff-tune
Improving stability of the performance of Tersoff/Kokkos across compiler and Kokkos versions
2022-10-17 21:26:55 -04:00
598e8cc488 Port changes to other Tersoff styles 2022-10-17 15:31:34 -06:00
ad048a20d7 Remove unused variables 2022-10-17 14:42:09 -06:00
637810515a make compute rigid/local consistent with other "possible attributes" docs 2022-10-17 14:51:10 -05:00
c03f5a42e6 Merge pull request #3490 from yury-lysogorskiy/upd/refactor-includes
ML-PACE: upd/refactor includes
2022-10-17 14:12:46 -04:00
57dad8dc39 Host path needs RangePolicy 2022-10-17 11:25:01 -06:00
fc8d9207c6 update Makefile.lammps, too. 2022-10-17 12:22:28 -04:00
a981843686 forgot updated Makefile 2022-10-17 11:51:50 -04:00
677997699d more consistency 2022-10-15 15:35:29 -04:00
9f20347375 update PACE library for conventional build 2022-10-15 15:10:01 -04:00
ed59ee6cad Merge branch 'ml-pace-include-refactor' into upd/refactor-includes 2022-10-15 15:07:55 -04:00
c8aea98b20 Merge branch 'develop' into ml-pace-include-refactor 2022-10-15 15:05:16 -04:00
4bf1339950 update pair_pace.cpp / pair_pace_extrapolation.cpp 2022-10-15 18:23:59 +02:00
2f60db4aba Merge remote-tracking branch 'upstream/develop' into upd/refactor-includes
# Conflicts:
#	cmake/Modules/Packages/ML-PACE.cmake
2022-10-15 18:07:07 +02:00
33681b5d84 WIP: update ML-PACE.cmake 2022-10-15 18:06:07 +02:00
9e43e9792c Fixed a couple more mathbf->boldsymbol errors in fix brownian doc 2022-10-15 10:47:33 -05:00
09a14d558d explicitly select Times New Roman for \textrm, Helvetica for \textsf and Times New Roman for math as well 2022-10-14 21:27:55 -04:00
2b18f6a3d3 replace tab 2022-10-14 21:27:00 -04:00
b586b72ddd removed an extra space 2022-10-14 18:27:21 -05:00
77958b5ef1 Missed one I->i edit 2022-10-14 18:04:49 -05:00
e346151271 Updated docs for fixes bond/break, bond/create, and bond/react for math/etc. 2022-10-14 17:40:22 -05:00
3d0a7d774a Updated docs for fix bocs to match source code and include math 2022-10-14 16:04:07 -05:00
7550fdc862 Sphinx conf edit so PDF ToC entries w/ subsections >= 100 work 2022-10-14 15:28:55 -05:00
adb93d92ec Merge branch 'lammps:develop' into feature/tersoff-tune 2022-10-14 10:47:08 -04:00
e37672e7de Abstracted Tersoff potential calculation into a stand-alone function; used it to create MDRangePolicy and TeamPolicy versions of Tersoff with more tunable -> higher performance 2022-10-14 10:45:59 -04:00
e3c78b70ed Fixed remaining discrepancies between lists of keywords and doc of them 2022-10-13 23:00:13 -05:00
edcdedc574 made keyword lists and descriptions consistent for all fix styles 2022-10-13 19:20:08 -05:00
70fd789b4c missing format keyword in fix ave/time doc 2022-10-13 14:51:30 -05:00
3703af9887 Missing keyword in fix_ave_histo doc 2022-10-13 14:48:26 -05:00
3607fd766b Missing key word in fix/ave/chunk docs, edits to bond_coeff docs 2022-10-13 14:42:10 -05:00
8027e02cbb Merge branch 'lammps:develop' into doc-fixes 2022-10-13 09:00:07 -05:00
77740c4f07 Merge pull request #3482 from stanmoore1/slabcorr
Fix issue with KSpace slab correction energy with non-neutral systems
2022-10-11 21:12:38 -04:00
d499c2f61b Merge pull request #3474 from stanmoore1/kk_update_3.7
Update Kokkos library in LAMMPS to v3.7.0
2022-10-11 16:30:19 -04:00
1e6321a1e9 Update INTEL package 2022-10-11 11:17:03 -06:00
955b615e1e Fix undef var 2022-10-11 10:36:22 -06:00
01c022f83d Fix variable definition 2022-10-11 10:10:27 -06:00
877f4e7e29 Fix issue with KSpace slab correction energy with non-neutral systems 2022-10-11 09:43:18 -06:00
18f91bc565 Merge pull request #3480 from aliehlen/dielectic-doc-updates
Documentation updates for DIELECTRIC package
2022-10-10 19:38:16 -04:00
3e1acfc500 Update Kokkos Arch in docs 2022-10-10 16:29:55 -06:00
11111d1b88 Merge branch 'develop' of github.com:lammps/lammps into kk_update_3.7 2022-10-10 15:41:43 -06:00
26f05b336f Merge pull request #3477 from stanmoore1/kk_bugfixes
Fix several minor issues
2022-10-10 17:27:47 -04:00
1bc16d8a78 fix spelling and table format issues. re-wrap paragraphs in doc sources. 2022-10-10 17:26:13 -04:00
ali
a38054cf32 change area_per_patch to area/patch 2022-10-10 16:03:09 -05:00
c113253e2d Merge branch 'develop' of https://github.com/lammps/lammps into kk_update_3.7 2022-10-10 13:44:02 -07:00
5c82c8a8a3 improve error messages 2022-10-10 16:37:20 -04:00
185639f077 must use utils::inumeric() for parsing integers 2022-10-10 16:37:04 -04:00
aea3421311 whitespace fixes 2022-10-10 15:26:40 -04:00