Commit Graph

32822 Commits

Author SHA1 Message Date
cc2ba3c350 make sure parameters are stored symmetrically 2022-03-18 13:02:34 -04:00
f928cc2335 update github managers. 2022-03-18 11:37:49 -04:00
008c000bfe update LAMMPS theme for HTML pages from readthedocs theme to version 1.0.0 2022-03-18 07:44:47 -04:00
815718f33a follow conventions 2022-03-18 06:06:48 -04:00
bc8998c997 correct toycar input example 2022-03-18 06:02:38 -04:00
477d53bcdb check for sufficient number of arguments in command line 2022-03-18 06:02:38 -04:00
734d867a91 use preprocessor for conditional compilation 2022-03-18 06:02:28 -04:00
626b2c4bab use utility functions 2022-03-18 05:52:34 -04:00
43b4240503 use sizeof(double) not sizeof(MPI_DOUBLE), bigint instead of long int
also use fmt::print() for typesafe output
2022-03-18 05:51:35 -04:00
32612d3f5b enable and apply clang-format 2022-03-18 00:06:28 -04:00
6d38ce5284 enable and apply clang-format 2022-03-17 23:40:37 -04:00
e12e06198c enable long md and min runs 2022-03-17 17:58:26 -06:00
85e581eb2a enable and apply clang-format 2022-03-17 19:44:53 -04:00
58030009da new math constants: DEG2RAD and RAD2DEG 2022-03-17 19:44:34 -04:00
6e7eedf148 enable and apply clang-format 2022-03-17 18:41:17 -04:00
fb8074d294 renormalize line endings. add .gitattributes to configure them explicitly 2022-03-17 18:21:31 -04:00
fc532ae1a0 list submodules to be updated explicitly for compatibility with CMake 3.16 and later 2022-03-17 16:53:44 -04:00
1e21b8fac1 enable and apply clang-format 2022-03-17 15:37:50 -04:00
57cf2a735a add support for '-f' option to shell rm built-in command 2022-03-17 15:17:44 -04:00
8ffacb55ca enable and apply clang-format 2022-03-17 12:20:17 -04:00
982a5719c4 correct mixed up force and energy in pair style harmonic/cut 2022-03-17 12:18:36 -04:00
9dfb099197 change platform::mkdir() to create entire path like "mkdir -p"
update the documentation of the shell command to current state
and specifically explain the difference between built-in and
external commands and correct where built in commands were described
as calling external commands.
2022-03-17 11:34:50 -04:00
b7ea33332f spelling 2022-03-17 11:32:48 -04:00
1fbeba8fa7 remove dead code and silence compiler warnings 2022-03-17 10:12:00 -04:00
cf06f71514 more refactoring of MDI engine 2022-03-16 17:46:01 -06:00
9e91708e27 Merge pull request #3174 from akohlmey/collected-small-changes
Collected small changes
2022-03-16 16:20:28 -04:00
6d070c7043 more use of modernized APIs 2022-03-16 15:24:42 -04:00
396a95f7af Merge pull request #12 from weinbe2/neigh_transpose
Addition of a  "smart" transpose routine with scratch memory staging
2022-03-16 12:29:21 -06:00
7e2fef096f use accessor function to get and process list of fixes 2022-03-16 14:18:09 -04:00
d49c27e362 Added a "smart" transpose routine with scratch memory staging for neighbor table transposes between LR and LL 2022-03-16 14:12:20 -04:00
31bc7b2864 Merge pull request #3170 from akohlmey/auto-load-plugins
Automatically load LAMMPS plugins if they are in folders listed in LAMMPS_PLUGIN_PATH environment variable
2022-03-16 13:53:14 -04:00
4be3da727a include tools/python in whitespace check 2022-03-16 13:22:39 -04:00
bb4268518b make python 2 compatible 2022-03-16 12:56:19 -04:00
72425f1874 add '#' to make the list of headers a comment 2022-03-16 12:55:53 -04:00
b774464156 whitespace 2022-03-16 12:55:25 -04:00
ba19090631 Merge pull request #3173 from athomps/snap-inner
Inner cutoff switching function for SNAP descriptors and potentials
2022-03-16 12:43:23 -04:00
4894263215 Merge pull request #3167 from CDenniston/develop
Update LATBOLTZ package to new version
2022-03-16 12:22:48 -04:00
e3d4e80407 Merge branch 'develop' into collected-small-changes 2022-03-16 11:55:07 -04:00
0fd02ffd10 Merge pull request #3153 from aliehlen/log-pizza-updates
Log pizza updates
2022-03-16 11:50:31 -04:00
afc634eef2 Merge branch 'develop' of https://github.com/lammps/lammps into neigh_transpose 2022-03-16 08:44:09 -06:00
49b87f9929 enable/apply clang-format, remove redundant code, style fixes 2022-03-16 09:07:38 -04:00
edf7c274b9 Merge branch 'lj_cubic_error' of github.com:olavgal/lammps into collected-small-changes 2022-03-16 09:03:02 -04:00
92bfaeda10 fix bug where it was not possible to use an absolute path for write_coeff 2022-03-16 09:00:56 -04:00
0ac5d8223d Whitespace 2022-03-16 13:06:32 +01:00
8ac1d5bbc5 Error fixed. Epsilon and sigma must also be symmetric 2022-03-16 13:04:36 +01:00
7215939a89 Streamline documentation 2022-03-16 10:47:56 +00:00
8d341e0714 remove EVAL command 2022-03-15 17:13:15 -06:00
99fa769800 more syncing 2022-03-15 16:15:57 -06:00
2a171cf2a2 sync new and old versions with current LAMMPS 2022-03-15 16:10:54 -06:00
636f00276e sync with current Modify methods for fix lookup 2022-03-15 14:12:23 -06:00