Commit Graph

41204 Commits

Author SHA1 Message Date
c19fefb782 fix memory leak in test 2025-04-05 00:32:00 -04:00
12364742b1 no need to call allocate() of the base class 2025-04-04 17:20:40 -04:00
1308a61a46 must not allocate eatom and vatom in base class to avoid big memory leak 2025-04-04 17:18:29 -04:00
7c60bce3a2 cutghost is not used anyware; remove to plug memory leaks 2025-04-04 17:18:21 -04:00
4f47d59d1e add support for compiling fully static LAMMPS executable with libcurl 2025-04-04 16:03:11 -04:00
608be97c14 make consistent, remove ghost member map 2025-04-04 16:00:07 -04:00
088954fe79 don't mix malloc() and delete 2025-04-04 15:58:48 -04:00
2d56b01153 synchronize LAMMPS-GUI with upstream 2025-04-03 22:44:05 -04:00
6025dbd46f allow to set https_proxy via preferences if not set via environment variable 2025-04-03 22:32:56 -04:00
1fc6862046 set LAMMPS-GUI version 2025-04-03 22:30:18 -04:00
e135bd7696 looking for libcurl components fails for some installations 2025-04-03 18:48:22 -04:00
d984ba9e32 fix syntax error 2025-04-01 00:00:46 -04:00
b97611a919 switch CWD to home if default is "/" or contains "AppData" 2025-03-31 23:48:02 -04:00
43662165f0 forgot handling addstep_compute in setup() 2025-03-28 00:31:34 -04:00
0a9278d45b must use addstep_compute() on next time based or variable step dump output 2025-03-28 00:05:56 -04:00
177dbe638e fix bug with addstep_compute skipping on first step 2025-03-27 18:28:26 -04:00
6fcf20f098 correct data in data file and pair_coeff changes are no longer needed
also re-create reference log files
2025-03-25 03:03:59 -04:00
733f88d207 added boolean
the read_data is not reading slater boolean of pair_coeff
2025-03-25 03:03:52 -04:00
2b166f201e fix logic bug when writing coeffs to data file 2025-03-25 03:03:38 -04:00
748ffe0fa6 wrong qi*qj cuda code
correction of cutsq[mtype].z instead of extra[j].x !
2025-03-25 03:03:28 -04:00
9f418715b1 fix indexing bug for optional arguments of compute reduce and reduce/region 2025-03-19 17:06:25 -04:00
a23698f962 flag as maintenance version again 2025-03-17 17:51:05 -04:00
0435e156ba temporarily comment out incomplete run WHAM and plot results dialog for release stable_29Aug2024_update2 2025-03-16 19:02:43 -04:00
f8c51818e7 update to WHAM version 2.1.0 2025-03-16 17:25:55 -04:00
5e7377414e fix bug missing a read_int() when reading general triclinic rotation matrix 2025-03-14 12:19:43 -04:00
dea9c0f53c properly tally the SYNC time contributions to the ALL time entry
this way its contribution is not double counted when determining
the "Other" time data.
2025-03-10 12:17:22 -04:00
ea330c3c0f set stores_ids flag for some fixes as suggested by @sjplimp 2025-03-07 21:06:55 -05:00
266924d6e1 error out when trying unsupported pimd method with multiple processors per bead 2025-03-07 02:26:53 -05:00
928209c64b rewrite incorrect statement 2025-03-06 16:35:27 -05:00
36e03bcd36 reverse normalization between type pairs if the types were swapped on input 2025-03-06 13:16:01 -05:00
9f55ae6fdb use different method to enforce the C locale in LAMMPS GUI 2025-03-05 17:41:04 -05:00
a8b82f8e41 use pairwise cutoff for trimming unless a custom cutoff if given 2025-03-05 04:24:54 -05:00
3895f7100f only trim if neighbor list request has a custom cutoff 2025-03-05 04:24:45 -05:00
0b06bce086 bugfix from Trung to avoid problems with read_dump when not all MPI ranks have atoms 2025-02-26 13:43:18 -05:00
9c60b5f7af add test to detect if a potential file was incorrectly used with lgvdw yes 2025-02-25 21:42:59 -05:00
19c0242530 backport indexing bugfix from upstream 2025-02-24 21:47:21 -05:00
06ba77c554 adjust BondStyle:class2 epsilon for aarch64 and ppc64le builds 2025-02-24 15:32:26 -05:00
ddfad6853e move precomputation for factor_sqrt to individual Pair::compute() functions
the special_lj values may be changed for individual hybrid sub-styles
with pair_modify pair special. thus the factor_sqrt[] array may have
incorrect values when computed during Pair::init_style().
2025-02-24 08:41:54 -05:00
7cdad6fa06 fix typo 2025-02-23 05:31:20 -05:00
f068d8395a fix bug in angle style cosine/delta 2025-02-21 16:19:21 -05:00
13cc5fe9bd fix copy and paste bug 2025-02-19 07:37:02 -05:00
35edb0f3b1 move update to cutneighmin from neighbor lists requests with explicit cutoff to a better location 2025-02-14 19:16:58 -05:00
fb6d4eb607 correctly compute cutneighmin when multiple requests with different cutoff exist 2025-02-14 19:16:50 -05:00
260060f4a4 Fix view with wrong label 2025-02-14 17:05:31 -05:00
1f8f0f37c1 make certain that Contact::varflag is initialized 2025-02-13 20:59:53 -05:00
bae0fe562e Fix rare bug in KOKKOS, manifest when load balancing on GPUs and exchange comm is on host 2025-02-13 17:02:51 -05:00
07f56405a4 backport fixes to fix reaxff/species 2025-02-03 22:32:27 -05:00
5791ca7263 Fix bug in compute stress/cartesian density profile with periodic boundary conditions 2025-02-03 22:24:55 -05:00
87de8b79ca use byref() instead of pointer() 2025-02-03 22:21:26 -05:00
3c131f8c76 refactor catching exceptions during LAMMPS initialization
this will avoid the nasty segfaults with "cannot have multiple stdout capturers"
instead it will catch and display any exception thrown during init.
2025-02-03 21:56:20 -05:00