Commit Graph

31677 Commits

Author SHA1 Message Date
c1b664b4be improve error message and update unit tests accordingly 2022-08-17 13:25:47 -04:00
c8f379dbab whitespace 2022-08-17 13:18:55 -04:00
763fff27ec Merge branch 'distributed-grids' of github.com:lammps/lammps into distributed-grids 2022-08-17 13:18:17 -04:00
22a9bfebe5 reimplement utils::gridid_parse() function and update related code 2022-08-17 13:18:12 -04:00
eeb9209af8 bug fix 2022-08-17 10:55:28 -06:00
e2f2663df2 more changes from GridComm to Grid3d in packages 2022-08-17 10:08:34 -06:00
a6a37021a9 Merge branch 'distributed-grids' of github.com:lammps/lammps into distributed-grids 2022-08-17 08:52:13 -06:00
f8d119b073 change GridComm to Grid3d in DIELECTRIC package 2022-08-17 08:51:57 -06:00
7a0636ca0c whitespace fixes 2022-08-17 10:15:30 -04:00
9109677eb3 tweak to doc page 2022-08-16 17:17:15 -06:00
5e935519bf finished first draft of doc pages 2022-08-16 15:42:48 -06:00
206ab141c9 more doc info for per-grid commands 2022-08-16 11:33:55 -06:00
e6e9e1b59c initial doc pages 2022-08-15 17:29:11 -06:00
ce4ca06035 support for density, mass, temperature values 2022-08-15 16:02:46 -06:00
9750c72822 output of fix ave/grid 2022-08-12 10:50:19 -06:00
8b637b5b70 error check for particle mapping to grid 2022-08-11 13:51:42 -06:00
58800b5191 enable relancing to work with distributed grids 2022-08-11 13:28:50 -06:00
0e1463fdaa change AMOEBA grids to Grid3d from GridComm 2022-08-11 10:32:09 -06:00
faa225d658 Merge branch 'develop' into distributed-grids 2022-08-11 09:44:43 -06:00
208caacb89 Merge pull request #3390 from hammondkd/fortran2_updates
Fixed a bug (xz and yz reversed) in LAMMPS.F90 and changed mpif90 to …
2022-08-10 20:49:17 -04:00
b565d10a3d Merge pull request #3388 from chemshift/mliap-bug-3204
Mliap bug 3204
2022-08-10 19:33:59 -04:00
c9c3f68bdf Merge pull request #3387 from akohlmey/collected-small-changes
Collected small changes and bug fixes
2022-08-10 18:34:52 -04:00
f1cca7d37d Update __init__.py 2022-08-10 12:22:29 -06:00
15261aaa71 Fixed a bug (xz and yz reversed) in LAMMPS.F90 and changed mpif90 to mpifort in README for files in examples/COUPLE/fortran2 2022-08-10 11:11:27 -05:00
e592f0f139 clarify the function of -nonbuf a bit more 2022-08-10 07:03:57 -04:00
631f33feb5 remove redundant calls 2022-08-10 06:57:59 -04:00
3a4a0078cd whitespace 2022-08-09 16:51:48 -04:00
6eb51a68d9 move dump command after reset_timestep to avoid crash 2022-08-09 16:51:48 -04:00
c8b6b052fc port sorting by time to python 3 while retaining compatibility with 2.7 2022-08-09 16:51:48 -04:00
111caac960 remove references to Numeric module. we only support numpy. 2022-08-09 16:11:09 -04:00
5c589dbe20 add -nonbuf / -nb command line flag to disable buffering for screen and logfile 2022-08-09 15:52:47 -04:00
ba7507c9e5 small tweaks 2022-08-09 14:47:58 -04:00
247a2b12b3 use utils::inumeric() instead of atoi() (not for parsing environment variables yet) 2022-08-09 14:30:44 -04:00
3178f05bbf Merge branch 'develop' into collected-small-changes 2022-08-09 14:25:53 -04:00
ee89ef6084 Merge pull request #3389 from cjknight/polaris_updates
one more env var for local mpi rank
2022-08-09 14:19:10 -04:00
d5170a1703 one more env var for local rank 2022-08-09 17:35:22 +00:00
7e0cad7d9e import fix from upstream 2022-08-08 15:40:19 -04:00
f7b0cb3bd4 AMOEBA induce bugfixes 2022-08-08 15:31:45 -04:00
92dc854ed4 workaround for IBM's XLClang compiler 2022-08-08 15:27:52 -04:00
fb2dd26d45 Merge pull request #3383 from hammondkd/doc-fixes
Documentation fixes
2022-08-08 14:51:38 -04:00
94403eaf76 Merge branch 'mliap-bug-3204' of https://github.com/chemshift/lammps into mliap-bug-3204 2022-08-08 12:09:07 -06:00
fd2ab2a8b9 Update __init__.py 2022-08-08 12:08:46 -06:00
5962dde035 Merge branch 'lammps:develop' into mliap-bug-3204 2022-08-08 11:47:16 -06:00
953d2c738b Update __init__.py 2022-08-08 11:45:43 -06:00
da8135c875 Merge pull request #3384 from akohlmey/collected-small-changes
Collected small changes and fixes
2022-08-08 11:11:49 -04:00
2227de3231 Update __init__.py 2022-08-07 23:00:35 -06:00
2d3504ff0f Locate correct dynamics library directories
in Anaconda Environments
2022-08-07 22:54:59 -06:00
3ca8df388d fix a couple of typos 2022-08-06 23:01:35 -04:00
42594bbbb7 Convert path to test inputs folder to native syntax on windows to make tests with file copying portable. 2022-08-06 22:46:52 -04:00
0f68aa80fe fix typo 2022-08-06 21:44:56 -04:00