Commit Graph

27378 Commits

Author SHA1 Message Date
c49a533ad9 reformat, simplify, add reference log files 2021-07-29 15:40:43 -04:00
b108da3e5c simplify format handling 2021-07-29 15:26:29 -04:00
dcff3d70e0 simplify fix instance creation 2021-07-29 15:18:58 -04:00
520109bda0 simplify 2021-07-29 14:55:22 -04:00
ebe5e6c024 reformat 2021-07-29 14:44:15 -04:00
5b6b6b8767 simplify and use utils functions 2021-07-29 14:33:41 -04:00
b5830b672a simplify logging code 2021-07-29 14:18:38 -04:00
9cf790a2fe simplify and use fmtlib 2021-07-29 14:09:49 -04:00
3a968b81ad update 2021-07-29 13:59:59 -04:00
b4e3795913 fix copy-n-paste error 2021-07-29 13:58:27 -04:00
43b3c97cc0 add unit tests for scafacos kspace solver (skipping p3m) 2021-07-29 13:57:02 -04:00
2a1177fa92 reformat with clang-format 2021-07-29 13:29:56 -04:00
508798ab2b simplify code, make use of fmtlib and utils 2021-07-29 13:25:06 -04:00
a9271b6d9a replace temporary char buffer with using fmtlib 2021-07-29 12:36:50 -04:00
b59f23068f Merge pull request #2851 from akohlmey/next_patch_release
Step version number strings for the next patch release
patch_28Jul2021
2021-07-28 15:26:03 -04:00
b2f70f4e1f Merge pull request #2855 from akohlmey/update-unittest
Correct a couple of unit tests for package reorganization
2021-07-28 14:15:01 -04:00
600471d07f skip run test with fix when fix is not available 2021-07-28 12:11:54 -04:00
74a27c102e correct prerequisite 2021-07-28 12:11:35 -04:00
ed34856961 Merge pull request #2854 from akohlmey/final-fixes-for-patch-release
Final fixes for the patch release
2021-07-27 20:31:52 -04:00
8e6b7bf6e5 Merge pull request #2853 from stanmoore1/kk_verlet
Fix bug in verlet_kokkos.cpp with GRANULAR package
2021-07-27 18:59:20 -04:00
bb5da016d4 add dependencies for KOKKOS style to the conventional build 2021-07-27 18:21:45 -04:00
269690b771 document hard package dependencies 2021-07-27 18:21:22 -04:00
fe34fe26b2 add a hard dependency on EXTRA-PAIR to the DIELECTRIC package 2021-07-27 18:21:08 -04:00
416048e939 Fix compile error 2021-07-27 15:57:06 -06:00
f20479f10e Fix typo 2021-07-27 15:47:42 -06:00
e47bd5c490 Merge branch 'master' of github.com:lammps/lammps into kk_verlet 2021-07-27 14:28:54 -06:00
c4eee478b1 move back to src for dependencies 2021-07-27 15:53:35 -04:00
de4322b54c whitespace fixes 2021-07-27 14:32:04 -04:00
3ff096e517 Merge pull request #2848 from akohlmey/collected-small-changes
Collected small changes for the next patch release
2021-07-27 14:24:12 -04:00
b1331f52a5 Merge pull request #2849 from wmbrownIntel/intel-omp-simd
Convert Intel package simd vectorization directives to OpenMP standard
2021-07-27 13:37:58 -04:00
dbe14d9ee7 Add missing method to Kokkos verlet 2021-07-27 11:22:20 -06:00
d292da78ca address CodeQL warnings and reformat with clang-format 2021-07-27 12:29:44 -04:00
f7f85822a9 move some more computes from EXTRA-COMPUTE back to src because of dependencies 2021-07-27 12:07:27 -04:00
8838fbc1c3 Merge pull request #2850 from akohlmey/lammps-gather-bonds
Implement lammps_gather_bonds() into the C-library interface and the Python module
2021-07-27 11:30:19 -04:00
ec069595f7 move compute orientorder/atom because compute coord/atom depends on it 2021-07-27 11:16:40 -04:00
2d488bab6b Merge branch 'master' into collected-small-changes 2021-07-27 11:15:00 -04:00
dab884fd1f Merge pull request #2829 from akohlmey/package-reorganization2
Package reorganization (step 2)
2021-07-27 10:55:32 -04:00
f39c5178d8 update plumed to version 2.7.2 and drop workaround for 2.7.1 2021-07-27 09:56:52 -04:00
16fae72670 small tweak for MinGW-64 compilation on Fedora 34 2021-07-27 08:44:59 -04:00
a4ffffad33 update some version strings for library and python APIs 2021-07-26 23:10:24 -04:00
044fe2e49d step version number strings for the next patch release 2021-07-26 23:09:18 -04:00
458253b452 add python interface with optional numpy support for lammps_gather_bonds()
unit tests are included
2021-07-26 22:40:21 -04:00
cc87e7eee3 add unit test for c-library interface function lammps_gather_bonds() 2021-07-26 20:59:14 -04:00
829bc8a617 update equation for updated NEB code 2021-07-26 18:45:37 -04:00
fdc75dcf35 add lammps_gather_bonds() function to the C library interface 2021-07-26 18:32:06 -04:00
f34f6b2a27 Merge branch 'master' of https://github.com/wmbrownIntel/lammps into intel-omp-simd 2021-07-26 12:10:37 -07:00
af359df042 Allowing nofdotr for Intel package with newton off. 2021-07-26 12:04:31 -07:00
fefcd0e2af Converting cilk vectorization directives to the openmp standard and changing some more depracated vector intrinsics. Data alignment directives for compiler vectorization are still mostly intel specific. 2021-07-26 11:22:21 -07:00
cca17feb27 silence compiler warnings, remove dead code 2021-07-26 12:31:09 -04:00
1fa621d02d correct quoted screen output 2021-07-25 21:18:52 -04:00