Commit Graph

33935 Commits

Author SHA1 Message Date
c68f754923 remove access to non-existing option 2022-12-27 13:59:56 -05:00
faa2a9ffeb remove Lepton source from lib/colvars folder 2022-12-27 13:59:34 -05:00
973dd04c87 update OPENMP package versions 2022-12-27 11:23:18 -05:00
7e984bfa2c update traditional make build support for shaking Lepton between LEPTON and COLVARS 2022-12-27 11:16:09 -05:00
989ec1b859 remove lmp/LMP_ prefix from Lepton namespace and files to share it with colvars 2022-12-27 10:57:43 -05:00
a5742a9147 make lepton package docs more consistent 2022-12-26 16:45:49 -05:00
5a99cf0dd5 add dihedral style lepton including /omp variant 2022-12-26 16:44:49 -05:00
24e5fafd7f more documentation tweaks and corrections. make consistent across package styles 2022-12-24 15:38:58 -05:00
be01ec2e07 document variable substitution 2022-12-24 05:53:18 -05:00
30a6a8a54e add support for substituting LAMMPS variables in Lepton expressions 2022-12-24 00:35:22 -05:00
7b3866d04c move lepton utilities to lepton_utils namespace in LEPTON package 2022-12-24 00:08:03 -05:00
3d7082499d update docs to include angle style lepton 2022-12-23 16:07:14 -05:00
67f0c48781 add angle styles lepton and lepton/omp 2022-12-23 15:34:01 -05:00
a2af2b4135 add versionadded tags 2022-12-23 12:15:36 -05:00
132a4cbc91 update traditional build for updated Lepton library and inclusion of asmjit 2022-12-23 12:13:10 -05:00
b67dcd7ca3 small tweaks 2022-12-23 06:30:00 -05:00
749adf3a59 one more tweak to allow more x86 platforms to use JIT with Lepton 2022-12-23 05:32:35 -05:00
acf683e9d0 define ASMJIT_STATIC to work around Windows issues 2022-12-23 01:35:05 -05:00
3a6492fc42 use JIT compiler only on Linux for now 2022-12-22 23:46:21 -05:00
09871a0178 mention JIT 2022-12-22 23:32:06 -05:00
a8c881aaf3 try to address linker issues with asmjit on older Linux machines 2022-12-22 23:09:09 -05:00
ae8f03803c Merge branch 'develop' into lepton-package 2022-12-22 22:52:20 -05:00
5b42064fcf add docs for lepton pair and bond style 2022-12-22 22:50:24 -05:00
e59f99b440 add support for JIT compilation 2022-12-22 22:50:01 -05:00
ca27fb3a98 update Lepton to current master branch 2022-12-22 22:47:45 -05:00
91c498c413 suppres explicit exports/import in Lepton lib 2022-12-22 16:32:17 -05:00
d9b1e318e8 add documentation for LEPTON package and lepton pair and bond style 2022-12-22 15:48:24 -05:00
07fe2fa29d Merge pull request #3570 from lammps/doc-ovito-info
OVITO info for dump doc page
2022-12-22 15:46:35 -05:00
d4af1834ec Update dump.rst 2022-12-22 10:44:03 -07:00
090a4a69b9 Merge pull request #3561 from lammps/map_ghost_bug
Fix bug when atoms are added after run
2022-12-22 12:27:56 -05:00
90cf1d6fca update VMD compatibility info, too. 2022-12-22 12:25:49 -05:00
0b7a55dac6 OVITO info in dump doc page 2022-12-22 08:11:22 -07:00
a5ecef708f correctly compute offsets. update unit test files. 2022-12-22 09:59:55 -05:00
e99bd14fd8 Merge branch 'develop' into lepton-package 2022-12-22 09:25:26 -05:00
8b8c0ee72d Merge pull request #3567 from akohlmey/next_patch_release
Set version strings for next patch release
patch_22Dec2022
2022-12-22 09:16:33 -05:00
ab72e95d0a restart offset for bond style lepton 2022-12-22 07:26:00 -05:00
2865929558 update for added source 2022-12-22 07:11:04 -05:00
48c23788f2 handle pair_modify shift and enforce the bond lepton has zero energy at r0 2022-12-22 07:10:48 -05:00
4cbe8b353b move shared functionality to utility function added to Lepton library 2022-12-22 05:37:59 -05:00
3bb6e1ab19 Merge branch 'develop' into lepton-package 2022-12-22 04:45:51 -05:00
ea8d90059a Merge pull request #3566 from akohlmey/collected-small-changes
Final collection of small changes for next patch release
2022-12-22 02:21:06 -05:00
5da8242690 add bond style lepton 2022-12-22 02:13:51 -05:00
966211bb53 avoid conflicting names 2022-12-22 02:13:28 -05:00
73c95d43af whitespace 2022-12-21 22:33:15 -05:00
46f514d2ca add support for writing binary restart files 2022-12-21 22:30:05 -05:00
4293771ae8 silence compiler warnings 2022-12-21 21:53:25 -05:00
e2f9d59484 whitespace fixes 2022-12-21 21:34:56 -05:00
cf0fb7f5df build system updates for presets and dependencies 2022-12-21 21:32:27 -05:00
8511aae211 add OPENMP package version of pair style lepton 2022-12-21 21:18:20 -05:00
c64066eb21 simplify processing of expressions 2022-12-21 21:16:59 -05:00