Commit Graph

17514 Commits

Author SHA1 Message Date
dbafb92dd5 cmake minor cleanup and removal of redundant code and empty lines 2019-06-11 14:02:41 -04:00
83060f0902 Merge branch 'master' into collected-small-fixes 2019-06-11 13:35:42 -04:00
fd55d7d367 update list of known LAMMPS keywords 2019-06-11 11:15:04 -04:00
3d5db63381 minor cleanup 2019-06-11 10:36:04 -04:00
42b0cb5e3e Merge pull request #1502 from rbberger/cmake_cleanup
Refactor CMake configuration
2019-06-11 10:19:07 -04:00
4cee333c07 need to use C++ compiler when checking for includes
this is the same bugfix as in PR #1504
2019-06-11 07:12:39 -04:00
7f4c611e21 must use C++ compiler to check for include files 2019-06-11 06:51:03 -04:00
fe29572737 Merge pull request #1496 from akkamesh/enh-ext-reaxc
reaxc/qeq optimization - using kokkos hierarchical parallelism
2019-06-10 21:37:12 -04:00
9421466f57 Merge branch 'master' into enh-ext-reaxc
Resolved Merge Conflict in src/KOKKOS/kokkos.cpp
2019-06-10 20:14:40 -04:00
8d985e53f4 Merge pull request #1494 from mkanski/extep_hybrid
Fix for extep when NULL or only some elements from potential file are used.
2019-06-10 20:04:24 -04:00
e72ac92a7f Merge pull request #1422 from stanmoore1/team_opt
Optimize KOKKOS package for small systems
2019-06-10 20:03:53 -04:00
3e2f3a8058 avoid a case of mixing malloc()/free() with new/delete 2019-06-10 18:22:04 -04:00
72b295d7f4 add support for internal style variables to info command 2019-06-10 18:21:17 -04:00
fa76472135 Add Kamesh as contributing author to fix_qeq_reax_kokkos 2019-06-10 15:48:53 -06:00
b368b11d60 Move ShowHelp test into Testing.cmake 2019-06-09 22:31:56 -04:00
591e6836fd Move CMake configuration for USER-H5MD into its own file 2019-06-09 22:24:59 -04:00
4ac100fe69 Define additional LAMMPS_*_DIRS to remove relative paths later 2019-06-09 22:05:53 -04:00
4ecd81f81b Move CMake configuration of PYTHON package into its own file 2019-06-09 21:48:05 -04:00
203c6d122b Move KSPACE CMake configuration into its own file 2019-06-09 21:37:34 -04:00
e788d32678 Move autogen check into utility function 2019-06-09 04:02:08 -04:00
ae59ffe83e Move more CMake configurations to own files 2019-06-09 03:54:52 -04:00
99a8d3c2ed Create CMake files for several packages
This remove the CMake configuration of several larger packages and places
it into their own files in the Modules/Packages folder.
 - COMPRESS
 - KIM
 - LATTE
 - MESSAGE
 - MSCG
 - USER-MOLFILE
 - USER-NETCDF
 - USER-PLUMED
 - USER-QMMM
 - USER-QUIP
 - USER-SCAFACOS
 - USER-SMD
 - USER-VTK
2019-06-09 03:35:25 -04:00
ca1445788e Move CMake configuration of VORONOI package into its own file 2019-06-09 03:23:23 -04:00
0908bd7aaf Move code coverage and testing into their own files 2019-06-09 03:18:20 -04:00
239dfe163c Simplify vim-files
Resolves #1500
2019-06-08 17:11:20 +05:30
cea1bd9cd9 Merging to stay up-to-date after patch 5Jun2019 2019-06-08 16:47:02 +05:30
31dc5dbb51 Fix variable type 2019-06-07 17:00:43 -06:00
9e3dc26599 Fix name in pair_exp6_rx_kokkos 2019-06-07 16:41:41 -06:00
8da75c2040 Merge branch 'master' of github.com:lammps/lammps into enh-ext-reaxc 2019-06-07 16:33:44 -06:00
85999fc4a7 Restore original compute_h in fix_qeq_reax_kokkos 2019-06-07 16:31:31 -06:00
73fa8d4055 Rename Kokkos variables 2019-06-07 16:30:02 -06:00
bd237a05b8 Tweak scalar view allocation 2019-06-07 15:46:04 -06:00
4941f11ad4 Remove unused tag 2019-06-07 15:37:49 -06:00
afab5ef303 Move CMake part on coverage into its own file 2019-06-07 12:24:35 -04:00
a7c02e699e Move CMake utilities into LAMMPSUtils.cmake 2019-06-07 12:18:49 -04:00
8fed39d726 Move CMake documentation build section into its own file 2019-06-07 12:16:01 -04:00
b9e10d55e2 Merge pull request #1492 from akohlmey/collected-small-changes
Collected small changes for the next patch
2019-06-07 11:07:10 -04:00
1f1a0f95b2 Merge pull request #1497 from junghans/check_for_immintrin
cmake: check for immintrin.h
2019-06-07 10:57:56 -04:00
61e9dc4c8d more accurate checking for styles using utils::strmatch() instead of strcmp() or strncmp() 2019-06-07 07:14:57 -04:00
b53df3dd63 disable optimization on functions building factories for many entries
this will speed up compilation and also avoid spurious warnings with gcc 4.4 and later
2019-06-06 20:37:17 -04:00
56e3b1d1f4 remove dead code 2019-06-06 20:22:08 -04:00
fde7e2de3c switch to use alternate flag 2019-06-06 15:08:26 -04:00
e2391edce6 turn off only variable tracking and make people wait again 2019-06-06 14:44:28 -04:00
f7026491f1 Code reformat 2019-06-06 09:59:41 -06:00
40a2f275c2 Fix a few more issues resulting from "nelements != atom->types"
this also detects in a more safely fashion, whether there is data in the second part of the input file, that is still formatted for he first part.
2019-06-05 17:11:53 -04:00
e549f911f7 turn off variable tracking through turning off optimization for GCC 4.4 and later
This will avoid a difficult to interpret warning and in
addition speed up compilation of this one file by avoiding
to try to optimize something, that needs no optimization.
2019-06-05 14:36:08 -04:00
34dca6dc79 advance warning message about collecting styles and packages info to an earlier slot in the process 2019-06-05 14:32:02 -04:00
2ebc40deb3 cmake: check for immintrin.h 2019-06-05 11:13:48 -06:00
e9b4ab7363 Fixed potential file parsing when NULL or only some elements are used. 2019-06-05 16:12:24 +02:00
8e43a45925 Detect and error out on invalid kspace mesh settings. make coulomb and dispersion settings consistent 2019-06-05 01:10:44 -04:00