Commit Graph

17514 Commits

Author SHA1 Message Date
c0cfceb95c fix off-by-one errors 2019-05-29 14:03:00 -04:00
12fcf5f5ef properly set up pair style quip for hybrid and hybrid/overlay 2019-05-29 14:00:33 -04:00
cb8d89855d remove limitation to hybrid/overlay 2019-05-29 13:59:51 -04:00
b88158fc3b Fix issue in npair_kokkos 2019-05-29 11:16:38 -06:00
3b60686827 Small tweak to verlet_kokkos 2019-05-29 09:43:50 -06:00
c8d50c04a4 avoid memory leak and initialize class member pointers 2019-05-29 10:12:24 -04:00
e3e5a962b0 bond/react memory: correctly delete internal groups
internally-created groups should be deleted when unfixing bond/react
groups should not be deleted when LAMMPS exits (because they already have been)
2019-05-28 21:40:01 -06:00
35be1724e3 Commit JT 052819
- corrected examples in examples/SPIN/dipole_spin
- modified warning message in src/SPIN/pair_spin_dipole_*.cpp
2019-05-28 15:31:03 -06:00
d717101e94 Merge branch 'master' of https://github.com/lammps/lammps into team_opt 2019-05-28 14:02:22 -06:00
e44c877738 Add missing tag sync in fix_qeq_reax_kokkos 2019-05-28 10:21:29 -06:00
e133c60ff5 bond/react docs: better English 2019-05-26 20:28:28 -06:00
97be57be7b additional topology overflow check for reactions 2019-05-26 15:53:49 -06:00
5523c9e7f6 Merge pull request #48 from lammps/master
rebase
2019-05-26 15:42:13 -06:00
c2a200fe85 A function logfreq3(), for logarithmical spacing
Unlike logfreq(), this also allows for fractional ratios
Resolves #1471
2019-05-26 14:00:21 +05:30
e82e1c695a correct links in package documentation 2019-05-24 19:45:48 -04:00
2ee02cfadd Don't reallocate views every time in neigh_bond_kokkos 2019-05-24 11:27:09 -06:00
eea67bf3bf Add sync/modify for growing dvector 2019-05-22 08:52:57 -06:00
cfad0634ac Merge pull request #1465 from akohlmey/collected-minor-changes
Collected small changes and bugfixes
2019-05-21 16:55:19 -04:00
bd05228c71 Merge pull request #1464 from akohlmey/group-group-coord-num
Add option to restrict coordination number by group
2019-05-21 16:55:05 -04:00
0f1e4b0504 Merge pull request #1467 from stanmoore1/eam_kk
Fix bug in pair_style eam/alloy/kk and pair_style eam/fs/kk
2019-05-21 16:54:51 -04:00
439e7da03f Need auto-sync on for initialization 2019-05-21 11:47:55 -06:00
ed7c09ac81 Add missing character 2019-05-21 10:30:33 -06:00
0ee1daa46d Add Lenz to false-positive list 2019-05-21 10:24:24 -06:00
2fbc4f504d Per-atom virial is not yet supported with pppm/dipole 2019-05-21 10:16:13 -06:00
95ab056576 Add PPPM dipole reference 2019-05-21 10:07:41 -06:00
a0bc619550 Need to call atomKK version of sync/modified in Kokkos atom_vec styles 2019-05-21 09:21:55 -06:00
82b50706bd Commit2 JT 052019
- some corrections in the examples
- deleted an old doc files (now redundant)
2019-05-20 22:09:59 -06:00
e90eed9120 Commit JT 052019
- deleted old doc
- renamed new doc files
2019-05-20 21:48:05 -06:00
5f2f7d1575 Merge branch 'pppm_spin' of github.com:julient31/lammps into pppm_spin 2019-05-20 21:35:52 -06:00
3e60ec9be1 Merge branch 'clean-master2' of github.com:julient31/lammps into pppm_spin 2019-05-20 21:35:16 -06:00
d0c6484fb0 add false positive 2019-05-20 15:15:51 -04:00
0349e9fee9 update/correct list of example folders 2019-05-20 15:08:33 -04:00
55116db8fb avoid segfault and print more meaningful error message with empty lines in coeff sections 2019-05-20 14:15:04 -04:00
1041934568 Fix bug in pair_eam_alloy_kokkos and pair_eam_fs_kokkos 2019-05-20 10:01:40 -06:00
50082c287d sphinxcontrib-spelling has been updated for Sphinx 2.x. remove enforcing to use old version 2019-05-18 15:41:38 -04:00
e3823a521c remove leftover references to removed MEAM package 2019-05-18 15:36:13 -04:00
dc8b43a95f update docs and sources and for changes in this branch 2019-05-18 15:16:10 -04:00
601746b565 restore lost changes to fix gpu from upstream 2019-05-18 13:09:25 -04:00
35bb2ac2a3 fix typo 2019-05-18 09:25:20 -04:00
fbb78e7b78 Commit JT 051719
- removed qsymp pair style
- cleaned doc (pair/spin/diole and kspace_style)
- cleaned kspace .cpp/h files
2019-05-17 15:04:14 -06:00
c7eb9a8626 there really isn't a problem with calling this compute multiple times 2019-05-17 15:26:35 -04:00
803e0631c5 Added bispectrum compute 2019-05-16 22:11:06 -06:00
51a6bfd579 Added bispectrum compute 2019-05-16 22:01:45 -06:00
5b71b3fc57 Added bispectrum compute 2019-05-16 21:51:24 -06:00
e2ed9330b7 Merge branch 'master' into team_opt 2019-05-16 12:31:26 -06:00
41872e37e6 Merge branch 'pppm_spin' of github.com:julient31/lammps into pppm_spin
Conflicts:
	doc/src/pair_spin_dipole.txt
2019-05-16 10:34:33 -06:00
fb8d31422d fix typo 2019-05-16 09:06:17 -04:00
27a2d0cbd4 add option to restrict coordination number by group 2019-05-16 08:55:03 -04:00
0c0b106924 Commit2 JT 051519
- started doc pair_spin_dipole.txt
- renamed all pair/spin/dipole
- created and tested example pair/spin/dipole/cut
2019-05-15 20:49:05 -06:00
98d9c45ad9 compute_bispectrum 2019-05-15 17:18:24 -06:00