Commit Graph

17903 Commits

Author SHA1 Message Date
ca4f7b6579 Merge pull request #3399 from akohlmey/lookup-molecules
Refactor access to molecule templates
2022-08-17 15:29:11 -04:00
6e8db537c9 Merge pull request #3400 from vpalkar/unit-tests
Adding unit tests and improving errors in region commands
2022-08-17 13:19:27 -04:00
180e0125ce Improved fix wall/reflect changes 2022-08-17 08:38:43 +08:00
d8706ab0cb Merge branch 'unit-tests' of github.com:vpalkar/lammps into unit-tests 2022-08-16 17:03:11 -04:00
5cdc09d9c7 updated region_intersect and region_union to use utils missing cmd args 2022-08-16 16:59:12 -04:00
559ced9869 updated error messages and test for region.cpp 2022-08-16 16:52:19 -04:00
0b047ba22b improved error messages in fix_addforce,fix_indent,fix_setforce,fix_temp_rescale,fix_wall_reflect and thermo.cpp 2022-08-16 20:33:22 +08:00
3f9daa8608 whitespace fixes 2022-08-15 21:48:01 -04:00
bec86f3f04 added some death tests and more readable code for some error messages 2022-08-15 16:16:48 -04:00
43726c020a Merge pull request #3394 from crackboy88/improve-errors
Improve errors
2022-08-15 15:47:47 -04:00
000c63a7ce improved error messages for some more region commands 2022-08-15 15:12:26 -04:00
c1f81eb640 improved error messages in a bunch of region commands 2022-08-15 15:04:18 -04:00
eb600c7b9d Merge branch 'lammps:develop' into modernize-legacy 2022-08-15 10:55:59 -04:00
bf8ff3a8ca improved error messages for region cylinder 2022-08-14 23:27:55 -04:00
d047053473 improved some error messages in compute_msd,fix_indent and fix_nh.cpp 2022-08-15 10:51:29 +08:00
3292ee8299 Fixed the last change to modify_params function 2022-08-14 10:21:49 +08:00
f592e3184e simplify Molecule::check_attributes() 2022-08-13 16:56:53 -04:00
3c744772b8 add new api to access molecules. 2022-08-13 16:02:50 -04:00
d599a541b5 improved some error messages in velocity.cpp and dump.cpp 2022-08-13 19:10:57 +08:00
1fc9c31db5 Merge branch 'lammps:develop' into improve-errors 2022-08-13 09:36:27 +08:00
98593b4ad5 Improved from last revision of neighbor.cpp 2022-08-13 08:35:20 +08:00
0222da9f2b Merge pull request #3393 from akohlmey/test-amoeba
Add force style test for amoeba angle style and fix related bug
2022-08-12 15:05:13 -04:00
09b3cbafdc correctly handle the case where there are no atoms in the fix group 2022-08-12 10:46:07 -04:00
12c28c393d support dynamic groups, but only if nrepeat == 1 2022-08-12 10:45:35 -04:00
923976f154 Merge remote-tracking branch 'refs/remotes/origin/improve-errors' into improve-errors 2022-08-12 12:18:02 +08:00
6d624b782d made some changes on neighbor.cpp 2022-08-12 12:12:22 +08:00
e5219e6a10 fix bug in energy tally for 4-atom angle term 2022-08-11 22:50:57 -04:00
6e8c24372e Merge branch 'lammps:develop' into improve-errors 2022-08-11 19:19:13 +08:00
af1c772157 made some changes on minimize.cpp 2022-08-11 19:08:11 +08:00
631f33feb5 remove redundant calls 2022-08-10 06:57:59 -04:00
5c589dbe20 add -nonbuf / -nb command line flag to disable buffering for screen and logfile 2022-08-09 15:52:47 -04:00
ba7507c9e5 small tweaks 2022-08-09 14:47:58 -04:00
247a2b12b3 use utils::inumeric() instead of atoi() (not for parsing environment variables yet) 2022-08-09 14:30:44 -04:00
3178f05bbf Merge branch 'develop' into collected-small-changes 2022-08-09 14:25:53 -04:00
6873ebb17a LAMMPS code clinic 2022 project 2: Replacing find_compute with get_compute_by_id where possible. 2022-08-09 14:01:49 -04:00
d5170a1703 one more env var for local rank 2022-08-09 17:35:22 +00:00
899fa8166a Initial modifications LAMMPS code clinic 2022 2022-08-08 17:31:42 -04:00
7e0cad7d9e import fix from upstream 2022-08-08 15:40:19 -04:00
f7b0cb3bd4 AMOEBA induce bugfixes 2022-08-08 15:31:45 -04:00
92dc854ed4 workaround for IBM's XLClang compiler 2022-08-08 15:27:52 -04:00
fb2dd26d45 Merge pull request #3383 from hammondkd/doc-fixes
Documentation fixes
2022-08-08 14:51:38 -04:00
4ac74a4153 add is_os() special function to the variable command 2022-08-06 21:44:03 -04:00
b465d3c86f silence compiler warnings about unused variables 2022-08-06 19:59:37 -04:00
322dc9a4de incorporate bugfixes and some suggestions from PR #3314 2022-08-06 17:43:40 -04:00
485b3e7885 Resolve conflicts with devel branch 2022-08-05 23:30:41 -05:00
5734cce9d8 Updates documentation files to make them more consistent and some typo fixes (round 1) 2022-08-05 23:03:09 -05:00
99582c0f28 Merge pull request #3381 from akohlmey/update-fmtlib
Update embedded fmtlib code to version 9.0.0
2022-08-05 19:51:51 -04:00
b5c69e520d Merge pull request #3382 from akohlmey/coverity-fixes
Small updates and bugfixes from static code analysis
2022-08-05 17:55:13 -04:00
5b24e3aa3c Merge pull request #3379 from akohlmey/fix_store_global_peratom
Split internal fix STORE command into fix STORE/GLOBAL and fix STORE/PERATOM
2022-08-05 17:22:48 -04:00
1e099de59c fix initialization typo 2022-08-05 16:38:35 -04:00