ccacf0d4bb
Merge pull request #1048 from lammps/doc-reorg-start
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Documentation Refactoring: Section Start
2018-08-15 15:25:17 -06:00
6cc653f631
Merge pull request #1055 from rbberger/temporary_qsort_v_mergesort_bugfix
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favor qsort over mergesort for stable release
2018-08-15 15:14:43 -06:00
46f1e63a19
update to Authors for CMake addition
2018-08-15 15:14:01 -06:00
9e154abba0
remove pre-install of 3 default packages from docs
2018-08-15 14:55:48 -06:00
6069d392a3
favor qsort over mergesort for stable release
2018-08-15 16:44:31 -04:00
e541074697
Merge pull request #1050 from rbberger/fix_shared_lib_voro_build
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Generate Position Independent Code in ExternalProject Voro when necessary
2018-08-15 14:01:08 -06:00
c9131cf1de
drop FFTW2 support, and change doc pages
2018-08-15 13:54:37 -06:00
b9e2b26b65
Simplified change
2018-08-15 12:22:06 -04:00
023c8e5d6e
Correct option values to lower case in README.md
2018-08-15 11:31:22 -04:00
1776ade72e
Update CMake README.md
2018-08-15 11:23:02 -04:00
3bb8fefb12
Little tweak to error message
2018-08-15 10:57:45 -04:00
60c9477e96
Add option validation and remove extra variables in CMakeLists.txt
2018-08-15 10:50:51 -04:00
95bfc3b536
one more entry to lammps.book
2018-08-15 07:54:17 -06:00
1823fc2bd1
commands.txt -> commands_list.txt to avoid conflict with Commands.txt
2018-08-15 07:50:10 -06:00
6eededb190
one more tweak
2018-08-15 07:45:52 -06:00
6c90410260
one more file I forgot to commit
2018-08-15 07:44:36 -06:00
1f65150e16
60 -> sm_60 for GPU_ARCH
2018-08-15 07:34:20 -06:00
9c3748e07c
change Python.txt to Python_head.txt, adapt GPU package syntax
2018-08-15 07:31:31 -06:00
ad9126f30e
Kokkos bugfix for building with cmake
2018-08-14 22:19:20 -04:00
b72048097c
Correct Build_settings.txt
2018-08-14 22:17:40 -04:00
9526db44ce
Fix lammps.book and broken link
2018-08-14 22:10:08 -04:00
63f57bbece
small tweak on USER-INTEL section
2018-08-14 16:07:04 -06:00
7ec52784cb
more changes to doc pages and CMakeLists.txt
2018-08-14 15:44:25 -06:00
64d539d9d2
Disable sin/cos check in CMakeLists.txt since it breaks KOKKOS CUDA support
2018-08-14 11:56:57 -04:00
7ab11488d0
Added brief discussion on how to use presets files with CMake
2018-08-14 11:51:37 -04:00
3384c683df
Correct FFT_PACK in CMakeLists.txt
2018-08-14 11:41:22 -04:00
13bb02b100
Updated CMake build for USER-INTEL
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- Removed differences between MAKE/OPTIONS/Makefile.intel_cpu/coprocessor and
CMake compilation and added INTEL_ARCH to select between CPU and KNL.
- Added some sanity checks for requirements
- Added FindTBB
2018-08-13 19:58:54 -04:00
afbfaf0a8f
Change LAMMPS_SIZE_LIMIT to LAMMPS_SIZES and use lower case values
2018-08-13 15:53:50 -04:00
8634301b53
Limit depth of howto tocs
2018-08-13 11:48:32 -04:00
fef2b8260b
Correct CMake FFT settings in docs
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The upper or lowercase matters. It won't work with lower case.
2018-08-13 11:46:46 -04:00
6e8a68a420
fix a bunch of typos and broken links as detected by ebook-convert
2018-08-12 17:16:24 +02:00
11f04fde5c
fix typo
2018-08-12 16:44:31 +02:00
e01185c283
correct some errors and misconceptions about zlib and USER-OMP
2018-08-12 16:44:26 +02:00
907b061e0b
more updates to Build doc page
2018-08-10 15:04:33 -06:00
135b877161
Make sure -fPIC is passed to ExternalProject VORO if BUILD_SHARED_LIBS=on
2018-08-10 15:01:46 -04:00
28c03e4518
Merge pull request #1046 from rbberger/gpu_fix_deprecated
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Replace deprecated CUDA functions calls in GPU package
2018-08-10 09:30:02 -06:00
b33452040a
correct FFT definitions in docs and make -DFFT_KISSFFT explicit in CMake
2018-08-10 17:27:40 +02:00
ddd8533d81
make -DLAMMPS_MEMALIGN optional in CMake by checking of 0 alignment. also some rewording.
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this changes the CMake configuration file.
also, the special case of Windows not supporting posix_memalign() is documented.
some more explanations for FFTs and memory alignment are added
2018-08-10 16:33:20 +02:00
bc8939a08b
more corrections/rewrites/additions for OpenMP, QM/MM and USER-QUIP
2018-08-10 15:55:32 +02:00
f67b198c24
discourage the use of MEAM and REAX, which have been supersede by USER-MEAMC and USER-REAXC
2018-08-10 13:04:31 +02:00
13d1f26a0f
provide additional information about building QM/MM with QE
2018-08-10 12:15:49 +02:00
8318b96c11
update OpenMP support info in build basics
2018-08-10 11:54:51 +02:00
0b523cb48e
some rewording and updates for the traditional and cmake documentation
2018-08-10 11:38:59 +02:00
76289cd955
Add LAMMPS shared library instructions for CMake
2018-08-09 17:50:55 -04:00
edb535d36f
Fix some of the missing TODOs in cmake docs
2018-08-09 17:21:00 -04:00
4db08f5351
Some tweaks and corrections
2018-08-09 16:02:54 -04:00
630a46ad67
Move Manual_version to Intro
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It should not be its own chapter. The intro seems to be the right place for it.
2018-08-09 14:53:40 -04:00
aca9416c7f
Merge branch 'master' into doc-reorg-start and resolve merge conflicts with master
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Conflicts:
doc/src/Speed_kokkos.txt
doc/src/package.txt
2018-08-09 20:18:12 +02:00
f7164e593e
fix a few more broken or non-unique links
2018-08-09 20:09:11 +02:00
a5170e93ec
fix a bunch more broken, duplicate links and misformatted text
2018-08-09 19:46:25 +02:00
