Commit Graph

31269 Commits

Author SHA1 Message Date
db61bf609b plug memory leaks in couple examples 2023-01-25 21:48:29 -05:00
015fa4cb0a update embedded docs 2023-01-25 21:44:04 -05:00
62f6f91146 minor typo and rewording 2023-01-25 21:42:37 -05:00
e163b0b1d7 portability improvements for Solaris/OpenIndiana 2023-01-25 21:40:23 -05:00
169a886898 cannot test PYTHON package if it is not installed 2023-01-25 21:37:22 -05:00
cbd276c49d correct prototype for documentation 2023-01-25 21:32:03 -05:00
183c6c06ff small tweaks to the "breadcrumbs" part of the theme to avoid double inserting a separation character 2023-01-25 21:28:18 -05:00
93a46da58e add image to the cover page of the PDF version of the manual 2023-01-25 21:24:27 -05:00
6b6a47bd3c Small tweaks 2023-01-25 21:21:08 -05:00
4a0a98a0fd Small bugfixes for Kokkos 2023-01-25 21:20:59 -05:00
369ea4fd26 Add this 2023-01-25 21:17:30 -05:00
d63c002bf5 Use group for Kokkos nvt temp compute 2023-01-25 21:17:22 -05:00
0fafe34008 import updates to library plugin loader from upstream 2023-01-13 05:21:33 -05:00
812363fb99 lammpsplugin bugfix from Stan 2023-01-12 18:24:04 -05:00
b40e0be1c9 reset to current state of the library interface and remove parts from upstream that have crept in 2023-01-12 12:08:00 -05:00
ccef293161 remove obsolete comment 2023-01-11 22:11:53 -05:00
4b0de87813 silence compiler warning 2023-01-11 21:59:35 -05:00
fa22aef31b Fix obscure bug in Kokkos neigh list build 2023-01-11 21:53:16 -05:00
cb7544a615 import modernization from upstream 2023-01-11 21:41:58 -05:00
a9be4906b7 import safer ghost cutoff determination for manybody GPU styles from upstream 2023-01-11 21:41:43 -05:00
6f36d21a04 GPU library updates 2023-01-11 21:34:42 -05:00
c55a15c4dc make AWPMD compatible with MSVC and c++-linalg on Windows 2023-01-11 21:23:03 -05:00
8f01dad1a9 add tools/tabulate 2023-01-11 21:21:51 -05:00
3cee69a077 correct Kokkos device/arch info ouput in CMake summary 2023-01-11 18:15:56 -05:00
69ffe71595 update unit tests for code corrections 2023-01-11 07:45:50 -05:00
16fa033111 fix issues with bundled meam/spline potentials 2023-01-11 06:40:54 -05:00
8e494aa771 updates and bugfixes for liblammpsplugin plugin loader for LAMMPS shared lib 2023-01-11 06:11:46 -05:00
f8de1b1a75 use official API for utils::logmesg(), stricter/consistent checking for integer and floats 2023-01-11 05:54:35 -05:00
de89a25a25 final CMake sync with upstream 2023-01-11 05:03:00 -05:00
293d0cdb58 fix typo 2023-01-11 01:26:54 -05:00
011f2651ee update 2023-01-11 01:26:48 -05:00
a8d3c43a77 update version 2023-01-11 01:26:35 -05:00
c19641f8b3 synchronize CMake scripting with upstream 2023-01-11 01:04:32 -05:00
6596b343ff sync docs with fire minimizer code features 2023-01-10 21:55:56 -05:00
b6dbb0330c update list of commands in pygments LAMMPS lexer 2023-01-10 21:55:56 -05:00
0dd138666a update for accelerated versions 2023-01-10 21:55:56 -05:00
33b9fec150 synchronize sphinx configuration with upstream 2023-01-10 21:55:56 -05:00
32b020a165 Increase communication cutoff for TIP4P pair styles, if needed
This avoids error of H atom not found when the O atom is a ghost.
2023-01-10 21:55:56 -05:00
c1db230331 Fix bug in Kokkos ReaxFF on GPUs 2023-01-10 21:55:56 -05:00
254c052ecc Fix GPU tag issues in other Kokkos styles 2023-01-10 21:55:56 -05:00
8e889dfa7c offset is not used (by construction of the potential) 2023-01-10 21:55:55 -05:00
5b6a52a646 correct suffix handling with compute fep 2023-01-10 21:55:55 -05:00
55f56deb63 bugfix for minimization with KOKKOS when using fix box/relax 2023-01-10 21:55:55 -05:00
bfe127a720 cosmetic 2023-01-10 21:55:55 -05:00
d95c8911a3 tweak intel compiler settings 2023-01-10 21:55:55 -05:00
0380f9d854 consistently prefix deep_copy() with Kokkos:: 2023-01-10 21:55:55 -05:00
71b1d60363 bugfix for gaussian bond/angle styles to avoid premature truncation of potential 2023-01-10 21:55:55 -05:00
8b1f92fabd better error handling when reading table files 2023-01-10 21:55:55 -05:00
419af0cf28 dead code removal 2023-01-10 21:55:45 -05:00
9030c59932 bugfix for nm/cut argument parsing 2023-01-10 21:55:21 -05:00