Commit Graph

17038 Commits

Author SHA1 Message Date
0108855930 update .gitignore for the doc folder 2019-02-14 02:54:02 -05:00
d08979737c bond/react:partially_revert_bonding_atom_choice
choose closest eligible bonding partner, unless directly bonded (in which case we assume a bond-breaking reaction)
2019-02-13 22:56:56 -07:00
13f1c7d2d7 bond/react_VLA_compliance 2019-02-13 20:42:52 -07:00
b7ee3606db Merge pull request #44 from lammps/master
rebase
2019-02-13 20:01:34 -07:00
88b62fa6bd add old style PDF build to "make old" target.
this will create the old style Manual.pdf in the old folder and put Developer.pdf there, too.
2019-02-13 12:43:35 -05:00
34d4209197 Merge pull request #1331 from akohlmey/collected-small-changes
Collected small changes
2019-02-13 16:47:27 +01:00
528e6632ed OpenMP doesn't use "version #.#" with their specs, but just OpenMP #.# 2019-02-13 10:41:43 -05:00
eaf2ca9c84 Merge pull request #1272 from lammps/utility-functions
Add library of utility functions to make LAMMPS code simpler and more consistent.

This is the first part of multiple pull requests that will add some more of these functions and will apply them to more of LAMMPS.
2019-02-13 16:30:46 +01:00
a645278d6b Merge pull request #1325 from Adrian-Diaz/shrink_wrap_tiled
Support shrink wrap boundary condition when reading data files with comm tiled enabled
2019-02-13 16:28:58 +01:00
9ac908f05f switch download server for voro++ from LBL to download.lammps.org, which seems much more reliable 2019-02-13 09:53:20 -05:00
581b7d3543 update list of false positives after docs changes 2019-02-13 09:23:54 -05:00
8bed429ab7 reduce warnings due to signed/unsiged comparisons 2019-02-13 07:42:25 -05:00
393948f363 dead code removal and compiler warning silencing 2019-02-13 07:42:25 -05:00
cf86334f43 using int instead of size_t should be more efficient and range doesn't seem to be needed 2019-02-13 07:42:25 -05:00
76533b1572 remove dead code and silence compiler warnings in USER-YAFF package 2019-02-13 07:42:24 -05:00
38b003261d silence compiler warnings about unused parameters in USER-OMP package 2019-02-13 07:42:24 -05:00
24ff914e5a silence compiler warnings about unused parameters in the GPU package 2019-02-13 07:42:24 -05:00
d6200fde93 add one more OpenMP version string 2019-02-12 12:17:36 -05:00
82187eaac3 fix stupid typo 2019-02-12 11:34:26 -05:00
36ad48b259 add OpenMP version detection and info output 2019-02-12 11:28:52 -05:00
eb8a6512e2 rename and document script to automatically convert 'default(none)' to 'default(shared)' OpenMP pragmas 2019-02-12 09:44:19 -05:00
6ff1557af8 More progress on doc page 2019-02-12 07:42:26 -07:00
ac7d74f2a5 silence some more compiler warnings about unused arguments 2019-02-12 08:07:44 -05:00
a0b7bf0f5c reformat fix wall/gran/region docs
this should make it easier to recognize that these walls can be
moving/rotating/growing/shrinking due to using time dependent
equal style variables in the region definition
2019-02-12 08:07:28 -05:00
e582c0d4e5 Update lammps.py 2019-02-12 08:20:54 +01:00
f5e3c53880 Update install.py 2019-02-12 08:08:22 +01:00
e7c1ca1fca Revert changes 2019-02-12 08:07:28 +01:00
b7413226e0 Several changes to new consolidated granular code:
- Normal contact models take Young's modulus and Poisson's ratio (instead of Young's and shear modulus)
- Mixing of Young's moduli corrected
- Changes to cutoffs corrected for JKR pulloff distance
- Renamed 'mindlin' to 'linear_history'
- Progress on doc page
2019-02-11 21:37:06 -07:00
4b8621e7ef Added additional tutorials for the dynamical matrix calculator 2019-02-11 19:46:22 -08:00
d2093fe8c2 fixing a version conflict for an if statement 2019-02-11 18:39:07 -07:00
39b6e0b7c8 allowing shrink wrap with comm tiled 2019-02-11 16:55:31 -05:00
277f8356b1 Update lammps.py 2019-02-09 08:46:22 +01:00
0fade44b43 Update install.py 2019-02-09 08:45:03 +01:00
b29d526632 Merge pull request #1323 from akohlmey/next-patch-release
Patch release 8 February 2019
patch_8Feb2019
2019-02-08 21:43:39 +01:00
77c24f1b79 Merge branch 'master' into next-patch-release
# Conflicts:
#	.github/PULL_REQUEST_TEMPLATE.md
2019-02-08 15:34:40 -05:00
b4765683da restore generic pull request template (for now) 2019-02-08 15:27:16 -05:00
f286155dd3 Merge pull request #1306 from stanmoore1/kk_angle_cosine
Add Kokkos version of angle/cosine
2019-02-08 21:07:36 +01:00
f04d97e66e Merge pull request #1312 from stanmoore1/kk_update
Update Kokkos library to v2.8.00
2019-02-08 21:07:23 +01:00
b871b4e13d Merge pull request #1321 from akohlmey/collected-small-fixes
Collected small fixes for the next patch release
2019-02-08 17:19:01 +01:00
8b449e569b Merge pull request #1318 from akohlmey/github-template-update
New GitHub PR templates
2019-02-08 17:18:30 +01:00
be6c2d781b Merge pull request #1322 from akohlmey/add-code-of-conduct
Add a code of conduct to lammps github project
2019-02-08 17:18:05 +01:00
a35f407dfc Patch release 8 February 2019 2019-02-08 17:15:22 +01:00
82355342bf improve wording about avoiding namespace imports in headers 2019-02-08 17:08:15 +01:00
773476634b Update Kokkos library in LAMMPS to v2.8.00 2019-02-08 08:50:26 -07:00
1b4ed9cb8d revert region optimization to create_atoms 2019-02-08 16:24:48 +01:00
997727d26c add a code of conduct to github project
complete the "github open source best practices" setup by adapting a
code of conduct for any public communications about LAMMPS on github.
2019-02-08 14:21:37 +01:00
a71159578e fix typo 2019-02-08 02:29:03 -05:00
ae85ca18fc provide multiple and more specific pull request templates 2019-02-07 15:53:46 +01:00
4d192e541e update github contribution guidelines text 2019-02-07 14:58:52 +01:00
8da5289638 add readme file adapted from https://github.com/pmla/polyhedral-template-matching/blob/master/README.md to USER-PTM package 2019-02-07 14:40:52 +01:00